Detailed information    

insolico Bioinformatically predicted

Overview


Name   spo0J   Type   Regulator
Locus tag   DP111_RS11150 Genome accession   NZ_CP030124
Coordinates   2213826..2214590 (+) Length   254 a.a.
NCBI ID   WP_014638879.1    Uniprot ID   G7SHV5
Organism   Streptococcus suis strain SH1510     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 2208826..2219590
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DP111_RS11135 (DP111_11135) - 2211208..2211891 (-) 684 WP_012775416.1 YoaK family protein -
  DP111_RS11140 (DP111_11140) rlmH 2211916..2212395 (-) 480 WP_023371894.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  DP111_RS11145 (DP111_11145) htrA 2212569..2213765 (+) 1197 WP_043032834.1 trypsin-like peptidase domain-containing protein Regulator
  DP111_RS11150 (DP111_11150) spo0J 2213826..2214590 (+) 765 WP_014638879.1 ParB/RepB/Spo0J family partition protein Regulator

Sequence


Protein


Download         Length: 254 a.a.        Molecular weight: 28966.21 Da        Isoelectric Point: 9.1678

>NTDB_id=299456 DP111_RS11150 WP_014638879.1 2213826..2214590(+) (spo0J) [Streptococcus suis strain SH1510]
MEELRTLNISEIHPNPYQPRIHFDEKELLELAQSIKENGLIQPIIVRKSSIIGYELLAGERRLRASQLAGLTTIPAVVKE
LTDDDLLYQAIIENLQRSNLNPIEEAASYQKLISRGLTHDEVAQIMGKSRPYISNLLRLLNLSSQTKQAVEEGQISQGHA
RQLVSFSEEKQAEWVQLILSKDLSVRTLEKLIAANKKKHTKLKQRDQFLKEQEDSLSKTLGTATKIIKKKNGSGEIRISF
NDLDEFERIINNFK

Nucleotide


Download         Length: 765 bp        

>NTDB_id=299456 DP111_RS11150 WP_014638879.1 2213826..2214590(+) (spo0J) [Streptococcus suis strain SH1510]
ATGGAAGAATTACGTACATTAAATATTTCAGAAATCCATCCCAATCCCTATCAGCCAAGAATTCATTTTGATGAAAAGGA
GCTACTTGAGCTCGCTCAATCCATTAAGGAAAATGGATTAATTCAACCGATTATTGTAAGAAAATCTTCTATTATCGGAT
ACGAATTATTAGCTGGAGAAAGAAGGTTGCGAGCCAGTCAATTAGCTGGACTGACTACAATACCAGCAGTGGTAAAGGAA
CTAACTGATGATGATTTACTCTATCAGGCTATCATAGAGAATCTACAGCGTTCTAACTTAAATCCGATAGAAGAAGCAGC
CTCTTATCAAAAATTGATTAGTAGAGGGTTAACGCATGATGAAGTTGCTCAAATCATGGGAAAATCAAGACCATATATCA
GTAATTTATTGCGCCTACTAAATCTATCATCTCAGACTAAACAAGCTGTAGAAGAAGGACAAATTTCACAAGGGCACGCG
CGACAATTGGTGTCATTTTCAGAAGAAAAGCAAGCCGAATGGGTTCAACTCATTTTATCAAAAGATTTAAGTGTGCGTAC
GCTTGAAAAATTAATAGCTGCAAATAAGAAAAAACACACTAAGCTTAAACAACGCGACCAATTTTTAAAAGAACAGGAAG
ATTCACTCAGTAAAACTCTTGGAACAGCTACAAAAATTATCAAGAAGAAAAACGGGAGCGGAGAAATTCGGATTAGCTTT
AATGACCTCGATGAATTCGAAAGAATTATCAACAATTTTAAATAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB G7SHV5

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

55.159

99.213

0.547


Multiple sequence alignment