Detailed information    

insolico Bioinformatically predicted

Overview


Name   letA   Type   Regulator
Locus tag   ETA18_RS19480 Genome accession   NZ_CP035400
Coordinates   3718062..3718436 (-) Length   124 a.a.
NCBI ID   WP_003227621.1    Uniprot ID   A0A9W5LLN9
Organism   Bacillus subtilis strain SRCM103835     
Function   regulate competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 3713062..3723436
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ETA18_RS19455 (ETA18_19455) - 3713226..3713387 (-) 162 WP_003227632.1 hypothetical protein -
  ETA18_RS19460 (ETA18_19460) glpX 3713602..3714567 (-) 966 WP_014481197.1 class II fructose-bisphosphatase -
  ETA18_RS19465 (ETA18_19465) murAB 3714598..3715887 (-) 1290 WP_003227628.1 UDP-N-acetylglucosamine 1-carboxyvinyltransferase -
  ETA18_RS19470 (ETA18_19470) fsa 3716266..3716904 (-) 639 WP_003227626.1 fructose-6-phosphate aldolase -
  ETA18_RS19475 (ETA18_19475) fbaA 3717024..3717881 (-) 858 WP_003243339.1 class II fructose-bisphosphate aldolase -
  ETA18_RS19480 (ETA18_19480) letA 3718062..3718436 (-) 375 WP_003227621.1 sporulation initiation phosphotransferase Spo0F Regulator
  ETA18_RS19485 (ETA18_19485) ywjG 3718602..3719123 (+) 522 WP_024572667.1 DUF2529 domain-containing protein -
  ETA18_RS19490 (ETA18_19490) pyrG 3719205..3720812 (-) 1608 WP_003227612.1 glutamine hydrolyzing CTP synthase -
  ETA18_RS19495 (ETA18_19495) rpoE 3721054..3721575 (-) 522 WP_003243661.1 DNA-directed RNA polymerase subunit delta -
  ETA18_RS19500 (ETA18_19500) acdA 3721758..3722897 (-) 1140 WP_128993504.1 acyl-CoA dehydrogenase AcdA -

Sequence


Protein


Download         Length: 124 a.a.        Molecular weight: 14227.68 Da        Isoelectric Point: 4.6400

>NTDB_id=299406 ETA18_RS19480 WP_003227621.1 3718062..3718436(-) (letA) [Bacillus subtilis strain SRCM103835]
MMNEKILIVDDQYGIRILLNEVFNKEGYQTFQAANGLQALDIVTKERPDLVLLDMKIPGMDGIEILKRMKVIDENIRVII
MTAYGELDMIQESKELGALTHFAKPFDIDEIRDAVKKYLPLKSN

Nucleotide


Download         Length: 375 bp        

>NTDB_id=299406 ETA18_RS19480 WP_003227621.1 3718062..3718436(-) (letA) [Bacillus subtilis strain SRCM103835]
ATGATGAATGAAAAAATTTTAATCGTTGATGATCAATACGGCATTCGTATTTTGCTAAATGAAGTGTTCAATAAAGAAGG
CTACCAGACGTTTCAGGCTGCGAACGGCCTGCAGGCGCTTGACATTGTGACAAAAGAACGGCCCGACCTTGTGCTCTTGG
ACATGAAAATTCCCGGCATGGACGGAATCGAAATCTTAAAACGGATGAAGGTCATTGACGAAAACATCCGGGTCATTATC
ATGACGGCATACGGAGAGCTCGACATGATCCAGGAATCGAAGGAATTGGGCGCCCTGACGCACTTTGCAAAGCCGTTTGA
CATCGACGAAATCAGAGACGCCGTCAAAAAATATCTGCCCCTGAAGTCGAACTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A9W5LLN9

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  letA Legionella pneumophila str. Paris

38.462

94.355

0.363

  letA Legionella pneumophila strain ERS1305867

38.462

94.355

0.363


Multiple sequence alignment