Detailed information NTG0299376

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: ETA18_RS14415
• Genome accession: NZ_CP035400
• Coordinates: 2752684..2753946 (-)
• Length: 420 a.a.
• NCBI ID: WP_003229613.1
• Uniprot ID: A0ABU0V489
• Organism: Bacillus subtilis strain SRCM103835
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 2747684..2758946

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ETA18_RS14400 (ETA18_14400)	yihA	2747783..2748370 (-)	588	WP_003229621.1	ribosome biogenesis GTP-binding protein YihA/YsxC	-
ETA18_RS14405 (ETA18_14405)	lon	2748367..2750691 (-)	2325	WP_003229618.1	endopeptidase La	-
ETA18_RS14410 (ETA18_14410)	lonB	2750872..2752530 (-)	1659	WP_014477564.1	ATP-dependent protease LonB	-
ETA18_RS14415 (ETA18_14415)	clpX	2752684..2753946 (-)	1263	WP_003229613.1	ATP-dependent protease ATP-binding subunit ClpX	Regulator
ETA18_RS14420 (ETA18_14420)	tig	2754218..2755492 (-)	1275	WP_014480469.1	trigger factor	-
ETA18_RS14425 (ETA18_14425)	ddcA	2755720..2756724 (-)	1005	WP_128480822.1	DNA damage checkpoint antagonist DdcA	-
ETA18_RS14430 (ETA18_14430)	leuD	2756843..2757442 (-)	600	WP_032726329.1	3-isopropylmalate dehydratase small subunit	-
ETA18_RS14435 (ETA18_14435)	leuC	2757455..2758873 (-)	1419	WP_003229604.1	3-isopropylmalate dehydratase large subunit	-

Sequence

Protein

• Length: 420 a.a.
• Molecular weight: 46350.22 Da
• Isoelectric Point: 4.5879

>NTDB_id=299376 ETA18_RS14415 WP_003229613.1 2752684..2753946(-) (clpX) [Bacillus subtilis strain SRCM103835]
MFKFNEEKGQLKCSFCGKTQDQVRKLVAGPGVYICDECIELCTEIVEEELGTEEEVEFKDVPKPQEIREILNEYVIGQDQ
AKKSLAVAVYNHYKRINSNSKVDDVELSKSNISLIGPTGSGKTLLAQTLARILNVPFAIADATSLTEAGYVGEDVENILL
KLIQAADYDVEKAEKGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTVASVPPQGGRKHPHQEFIQIDTTNI
LFICGGAFDGIEQIIKRRLGQKVIGFGADNKAADLEKEDLLSKVLPEDLLRFGLIPEFIGRLPVIASLEKLDEEALVAIL
TKPKNALVKQFKKMLELDNVELEFEEEALSEIAKKAIERKTGARGLRSIIEGIMLDVMFELPSRDDIEKCVITGATVTHG
EPPRLLLKDGTEVSQDKTSA

Nucleotide

• Length: 1263 bp

>NTDB_id=299376 ETA18_RS14415 WP_003229613.1 2752684..2753946(-) (clpX) [Bacillus subtilis strain SRCM103835]
ATGTTTAAATTTAACGAGGAAAAAGGACAATTAAAATGCTCGTTCTGTGGAAAAACACAAGATCAGGTTCGTAAGCTTGT
AGCTGGACCTGGTGTATATATATGTGACGAATGTATCGAACTCTGCACTGAAATTGTAGAGGAAGAACTCGGAACAGAAG
AAGAAGTAGAATTTAAAGACGTACCAAAGCCTCAGGAAATTCGCGAAATTTTGAATGAATATGTCATCGGCCAAGATCAA
GCGAAGAAATCACTTGCTGTTGCTGTGTATAACCACTATAAGCGCATTAACTCTAACAGCAAAGTTGATGATGTTGAGCT
CTCAAAAAGTAATATTTCATTAATCGGCCCTACGGGAAGCGGTAAAACCCTTCTGGCGCAAACATTGGCTCGCATTTTAA
ATGTGCCGTTTGCGATTGCGGACGCTACATCTTTGACTGAAGCTGGATACGTGGGTGAAGATGTAGAGAATATTCTCTTG
AAGCTCATCCAAGCTGCTGATTATGATGTGGAAAAAGCCGAAAAAGGCATTATCTATATTGATGAAATCGATAAAGTGGC
TAGAAAATCTGAAAACCCGTCTATCACACGTGATGTGTCAGGTGAGGGTGTACAGCAGGCATTGCTTAAAATTCTTGAGG
GTACAGTGGCAAGCGTGCCGCCTCAAGGTGGACGTAAGCATCCTCATCAAGAATTCATTCAAATTGACACAACAAATATT
TTGTTCATTTGCGGCGGAGCTTTCGATGGTATCGAACAAATCATCAAACGCCGTTTAGGCCAAAAAGTGATTGGATTCGG
TGCCGACAATAAAGCTGCTGATCTTGAGAAAGAAGATCTTCTTTCAAAAGTGCTTCCTGAAGATTTGCTCCGTTTCGGGT
TAATTCCTGAATTTATCGGACGTCTTCCGGTTATTGCAAGCCTTGAAAAGCTTGACGAAGAAGCATTGGTTGCGATCTTA
ACAAAACCGAAAAACGCTCTTGTTAAGCAATTCAAGAAAATGCTTGAGCTTGATAACGTTGAGCTTGAGTTTGAAGAAGA
AGCGCTTTCTGAAATTGCTAAAAAAGCAATTGAACGCAAGACTGGAGCACGCGGACTCCGTTCCATCATTGAAGGCATCA
TGCTTGATGTTATGTTTGAGCTGCCTTCTCGTGATGACATTGAAAAATGTGTAATTACCGGGGCAACTGTGACACACGGA
GAGCCTCCTCGCCTCTTATTAAAAGACGGCACTGAGGTAAGCCAAGATAAAACATCTGCATAA

Domains

Predicted by InterProScan.

• AAA domain (Cdc48 subfamily) (AAA_2) (109-305)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (311-389)

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	68.01	94.524	0.643
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	60.506	94.048	0.569