Detailed information    

insolico Bioinformatically predicted

Overview


Name   recP/tkt   Type   Machinery gene
Locus tag   ETA18_RS09740 Genome accession   NZ_CP035400
Coordinates   1919716..1921719 (+) Length   667 a.a.
NCBI ID   WP_014476936.1    Uniprot ID   -
Organism   Bacillus subtilis strain SRCM103835     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 1914716..1926719
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ETA18_RS09700 (ETA18_09700) pghL 1915078..1915836 (+) 759 WP_014479934.1 gamma-polyglutamate hydrolase PghL -
  ETA18_RS09705 (ETA18_09705) - 1915863..1916312 (-) 450 WP_014479935.1 YndM family protein -
  ETA18_RS09710 (ETA18_09710) fosM 1916521..1916955 (+) 435 WP_032725818.1 FosM family fosfomycin resistance protein -
  ETA18_RS21800 - 1916864..1917141 (+) 278 Protein_1848 hypothetical protein -
  ETA18_RS09720 (ETA18_09720) dinR/lexA 1917494..1918111 (-) 618 WP_003238209.1 transcriptional repressor LexA Regulator
  ETA18_RS09725 (ETA18_09725) yneA 1918261..1918578 (+) 318 WP_003231598.1 cell division suppressor protein YneA -
  ETA18_RS09730 (ETA18_09730) dinL 1918597..1919250 (+) 654 WP_128992913.1 recombinase family protein -
  ETA18_RS09735 (ETA18_09735) ynzC 1919314..1919547 (+) 234 WP_003231595.1 DUF896 domain-containing protein -
  ETA18_RS09740 (ETA18_09740) recP/tkt 1919716..1921719 (+) 2004 WP_014476936.1 transketolase Machinery gene
  ETA18_RS09745 (ETA18_09745) sirA 1921872..1922318 (+) 447 WP_003231591.1 sporulation inhibitor of replication protein SirA -
  ETA18_RS09750 (ETA18_09750) yneF 1922404..1922622 (+) 219 WP_003221221.1 YneF family protein -
  ETA18_RS09755 (ETA18_09755) ynzD 1922696..1922869 (-) 174 WP_010886518.1 aspartyl-phosphate phosphatase YnzD -
  ETA18_RS09760 (ETA18_09760) ccdA 1923089..1923796 (+) 708 WP_003231585.1 cytochrome c-type biogenesis protein CcdA -
  ETA18_RS09765 (ETA18_09765) yneI 1923885..1924247 (+) 363 WP_014476939.1 response regulator -
  ETA18_RS09770 (ETA18_09770) yneJ 1924326..1924817 (+) 492 WP_072174017.1 CcdC family protein -
  ETA18_RS09775 (ETA18_09775) yneK 1924848..1925276 (-) 429 WP_003231580.1 DynA interaction protein YneK -
  ETA18_RS09780 (ETA18_09780) cotM 1925510..1925902 (-) 393 WP_128992915.1 outer spore coat protein CotM -
  ETA18_RS09785 (ETA18_09785) sspP 1925983..1926129 (-) 147 WP_003221237.1 small acid-soluble spore protein P -
  ETA18_RS09790 (ETA18_09790) sspO 1926161..1926307 (-) 147 WP_003244839.1 acid-soluble spore protein SspO -

Sequence


Protein


Download         Length: 667 a.a.        Molecular weight: 72300.39 Da        Isoelectric Point: 4.7291

>NTDB_id=299343 ETA18_RS09740 WP_014476936.1 1919716..1921719(+) (recP/tkt) [Bacillus subtilis strain SRCM103835]
MDTIEKKSVATIRTLSIDAIEKANSGHPGMPMGAAPMAYTLWTKFMNVSPANPGWFNRDRFVLSAGHGSALLYSMLHLSG
FDLSIEDLKGFRQWGSKTPGHPEFGHTAGVDATTGPLGQGIAMAVGMAIAERHLAETYNRDSFNVVDHYTYSICGDGDLM
EGISSEAASLAGHLQLGRLIVLYDSNDISLDGDLDRSFSENVKQRFEAMNWEVLYVEDGNNIEELTAAIEKARQNEKKPT
LIEVKTTIGFGSPNRAGTSGVHGAPLGKEESKLTKEAYAWTYEEDFYVPSEVYEHFAAAVKESGEKKEQEWNAQFAKYKE
VYPELAEQLELAIKGELPKDWDQEVPVYEKGSSLASRASSGEVLNGLAKKIPFFVGGSADLAGSNKTTIKNAGDFTAVDY
SGKNFWFGVREFAMGAALNGMALHGGLRVFGGTFFVFSDYLRPAIRLAALMGLPVTYVFTHDSIAVGEDGPTHEPVEQLA
SLRAMPNLSLIRPADGNETAAAWKLAVQSTDHPTALVLTRQNLPTIDQTAEEALAGVEKGAYVVSKSKNETPDALLIASG
SEVGLAIEAQAELAKENIDVSVVSMPSMDRFEKQSDEYKNEVLPADVKKRLAIEMGSSFGWGKYTGLEGDVLGIDRFGAS
APGETIINEYGFSVPNVVNRVKALINK

Nucleotide


Download         Length: 2004 bp        

>NTDB_id=299343 ETA18_RS09740 WP_014476936.1 1919716..1921719(+) (recP/tkt) [Bacillus subtilis strain SRCM103835]
ATGGATACAATTGAAAAGAAATCAGTTGCTACCATTCGCACACTGTCAATAGACGCTATTGAAAAAGCAAATTCTGGTCA
CCCAGGGATGCCGATGGGAGCCGCTCCAATGGCATACACGCTGTGGACAAAATTTATGAACGTAAGTCCGGCAAACCCTG
GCTGGTTTAACCGTGACCGTTTTGTTTTATCTGCTGGACACGGGTCAGCACTATTATACAGCATGCTTCATTTAAGCGGG
TTTGATCTTAGTATTGAAGATCTTAAGGGATTCCGCCAGTGGGGCAGCAAAACACCAGGACATCCGGAATTCGGACATAC
TGCCGGTGTTGATGCTACAACAGGTCCGCTTGGCCAAGGAATTGCCATGGCAGTCGGTATGGCAATTGCTGAACGCCATT
TAGCGGAAACATACAACCGCGATTCATTTAACGTAGTCGATCATTATACATACAGTATTTGCGGTGATGGTGATTTAATG
GAAGGTATTTCTTCTGAAGCCGCTTCACTCGCAGGCCATCTTCAGCTTGGCCGTCTGATCGTACTATACGATTCTAATGA
CATCTCTCTTGATGGAGACCTCGACCGTTCATTCTCTGAAAACGTGAAACAGCGTTTTGAAGCAATGAATTGGGAAGTTC
TTTATGTTGAGGATGGAAACAATATTGAAGAATTAACAGCGGCTATCGAAAAAGCACGCCAAAATGAAAAGAAACCTACA
TTAATTGAAGTGAAAACGACAATCGGATTCGGTTCACCTAACCGTGCCGGTACATCCGGTGTTCACGGTGCGCCGCTTGG
TAAAGAGGAAAGCAAATTAACAAAAGAAGCTTACGCGTGGACATATGAAGAAGACTTCTACGTTCCGTCAGAAGTTTATG
AGCATTTCGCTGCAGCTGTTAAAGAATCAGGTGAGAAAAAAGAACAAGAATGGAATGCTCAATTCGCTAAATATAAAGAA
GTTTATCCTGAACTTGCTGAACAGCTTGAACTGGCAATCAAAGGAGAGCTTCCGAAGGACTGGGATCAAGAGGTTCCTGT
GTATGAAAAAGGAAGCAGCCTGGCATCCCGTGCATCTTCCGGTGAAGTTCTCAACGGACTTGCGAAAAAAATTCCTTTCT
TTGTCGGAGGTTCTGCTGACCTAGCGGGATCGAACAAAACGACTATTAAAAATGCCGGTGATTTTACAGCGGTTGATTAC
TCAGGCAAAAACTTCTGGTTTGGTGTACGTGAATTTGCGATGGGTGCAGCCTTAAACGGTATGGCGCTTCATGGCGGTCT
TCGTGTATTCGGCGGAACTTTCTTTGTCTTCTCTGATTACCTGCGTCCTGCGATTCGCCTTGCAGCGTTAATGGGCCTTC
CTGTGACATATGTCTTCACACATGACAGTATTGCGGTTGGTGAAGACGGTCCGACGCACGAGCCTGTTGAACAGCTTGCT
TCACTCCGTGCGATGCCTAACCTTTCTTTGATCCGTCCAGCAGACGGCAATGAGACAGCAGCAGCATGGAAGCTTGCAGT
GCAAAGCACTGACCACCCAACAGCGCTAGTGCTTACACGTCAAAACCTTCCTACCATCGATCAAACAGCTGAAGAAGCAT
TGGCAGGAGTAGAAAAAGGTGCATATGTCGTTTCTAAATCTAAAAACGAAACACCTGACGCTCTTCTCATTGCCTCCGGA
TCAGAGGTAGGTCTTGCAATTGAAGCGCAGGCTGAATTGGCAAAAGAAAATATCGATGTTTCTGTTGTCAGCATGCCTTC
AATGGACCGTTTTGAGAAACAATCTGATGAATACAAAAACGAAGTCCTTCCTGCAGATGTGAAAAAACGTCTTGCAATTG
AAATGGGCTCATCATTTGGATGGGGCAAATACACAGGGCTTGAAGGTGACGTTCTCGGCATAGACCGATTCGGTGCATCT
GCTCCAGGTGAAACCATCATTAACGAATACGGCTTCTCAGTTCCGAACGTAGTGAATCGAGTTAAGGCATTAATCAATAA
GTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recP/tkt Streptococcus pneumoniae TIGR4

56.647

99.25

0.562