Detailed information    

insolico Bioinformatically predicted

Overview

Name   dinR/lexA   Type   Regulator
Locus tag   ETA18_RS09720 Genome accession   NZ_CP035400
Coordinates   1917494..1918111 (-) Length   205 a.a.
NCBI ID   WP_003238209.1    Uniprot ID   G4NVV3
Organism   Bacillus subtilis strain SRCM103835     
Function   repressor of recA; repressor of dinR (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1912494..1923111
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ETA18_RS09690 (ETA18_09690) yndJ 1912809..1914449 (+) 1641 WP_014479931.1 YndJ family protein -
  ETA18_RS09695 (ETA18_09695) - 1914539..1914853 (+) 315 Protein_1844 hypothetical protein -
  ETA18_RS09700 (ETA18_09700) pghL 1915078..1915836 (+) 759 WP_014479934.1 gamma-polyglutamate hydrolase PghL -
  ETA18_RS09705 (ETA18_09705) - 1915863..1916312 (-) 450 WP_014479935.1 YndM family protein -
  ETA18_RS09710 (ETA18_09710) fosM 1916521..1916955 (+) 435 WP_032725818.1 FosM family fosfomycin resistance protein -
  ETA18_RS21800 - 1916864..1917141 (+) 278 Protein_1848 hypothetical protein -
  ETA18_RS09720 (ETA18_09720) dinR/lexA 1917494..1918111 (-) 618 WP_003238209.1 transcriptional repressor LexA Regulator
  ETA18_RS09725 (ETA18_09725) yneA 1918261..1918578 (+) 318 WP_003231598.1 cell division suppressor protein YneA -
  ETA18_RS09730 (ETA18_09730) dinL 1918597..1919250 (+) 654 WP_128992913.1 recombinase family protein -
  ETA18_RS09735 (ETA18_09735) ynzC 1919314..1919547 (+) 234 WP_003231595.1 DUF896 domain-containing protein -
  ETA18_RS09740 (ETA18_09740) recP/tkt 1919716..1921719 (+) 2004 WP_014476936.1 transketolase Machinery gene
  ETA18_RS09745 (ETA18_09745) sirA 1921872..1922318 (+) 447 WP_003231591.1 sporulation inhibitor of replication protein SirA -
  ETA18_RS09750 (ETA18_09750) yneF 1922404..1922622 (+) 219 WP_003221221.1 YneF family protein -
  ETA18_RS09755 (ETA18_09755) ynzD 1922696..1922869 (-) 174 WP_010886518.1 aspartyl-phosphate phosphatase YnzD -

Sequence

Protein


Download         Length: 205 a.a.        Molecular weight: 22849.36 Da        Isoelectric Point: 5.1450

>NTDB_id=299342 ETA18_RS09720 WP_003238209.1 1917494..1918111(-) (dinR/lexA) [Bacillus subtilis strain SRCM103835]
MTKLSKRQLDILRFIKAEVKSKGYPPSVREIGEAVGLASSSTVHGHLARLETKGLIRRDPTKPRAIEILDEEVDIPQSQV
VNVPVIGKVTAGSPITAVENIEEYFPLPDRMVPPDEHVFMLEIMGDSMIDAGILDKDYVIVKQQNTANNGEIVVAMTEDD
EATVKRFYKEDTHIRLQPENPTMEPIILQNVSILGKVIGVFRTVH

Nucleotide


Download         Length: 618 bp        

>NTDB_id=299342 ETA18_RS09720 WP_003238209.1 1917494..1918111(-) (dinR/lexA) [Bacillus subtilis strain SRCM103835]
ATGACGAAGCTATCAAAAAGGCAACTTGATATCCTCCGTTTTATTAAAGCAGAGGTTAAATCAAAAGGATATCCGCCTTC
CGTGAGAGAGATCGGAGAGGCTGTCGGGCTTGCGTCCAGCTCTACTGTCCACGGCCATTTGGCCCGCTTGGAAACAAAAG
GGCTGATCAGACGGGATCCGACAAAACCAAGAGCAATAGAAATTCTTGATGAAGAAGTAGACATTCCGCAAAGCCAGGTC
GTTAATGTACCAGTCATCGGGAAAGTCACGGCGGGATCTCCTATTACTGCAGTAGAAAATATTGAAGAATATTTTCCGCT
CCCAGACCGCATGGTTCCTCCAGACGAGCATGTATTTATGCTGGAGATTATGGGAGACAGTATGATAGATGCTGGTATTC
TCGATAAGGACTATGTCATCGTTAAACAGCAAAACACAGCGAACAATGGGGAAATTGTAGTTGCGATGACAGAAGATGAT
GAAGCAACTGTAAAACGATTCTATAAAGAGGATACCCACATTCGCTTGCAGCCTGAGAACCCAACGATGGAACCTATCAT
TTTGCAGAATGTCAGCATTCTAGGGAAAGTGATTGGCGTGTTCAGGACCGTCCATTAA

Domains

Predicted by InterProScan.

LexA DNA binding domain (LexA_DNA_bind)

(1-65)

Peptidase S24-like (Peptidase_S24)

(84-198)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NVV3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dinR/lexA Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment