Detailed information
Bioinformatically predicted
Overview
| Name | xcpV | Type | Machinery gene |
| Locus tag | DPV67_RS03340 | Genome accession | NZ_CP030106 |
| Coordinates | 686827..687207 (+) | Length | 126 a.a. |
| NCBI ID | WP_000836914.1 | Uniprot ID | A0A098SJS3 |
| Organism | Acinetobacter baumannii strain DA33382 | ||
| Function | pseudopilus assembly (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 681827..692207
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DPV67_RS03310 (DPV67_03310) | kdsB | 682730..683491 (+) | 762 | WP_000680692.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | - |
| DPV67_RS03315 (DPV67_03315) | - | 683503..684483 (+) | 981 | WP_001075416.1 | DNA polymerase III subunit delta' | - |
| DPV67_RS03320 (DPV67_03320) | - | 684495..684836 (+) | 342 | WP_001183027.1 | PilZ domain-containing protein | - |
| DPV67_RS03325 (DPV67_03325) | - | 684854..685627 (+) | 774 | WP_000497300.1 | TatD family hydrolase | - |
| DPV67_RS03330 (DPV67_03330) | - | 685665..686273 (+) | 609 | WP_000375838.1 | TetR/AcrR family transcriptional regulator | - |
| DPV67_RS03335 (DPV67_03335) | - | 686283..686837 (+) | 555 | WP_000841373.1 | type II secretion system protein | - |
| DPV67_RS03340 (DPV67_03340) | xcpV | 686827..687207 (+) | 381 | WP_000836914.1 | type II secretion system minor pseudopilin GspI | Machinery gene |
| DPV67_RS03345 (DPV67_03345) | xcpW | 687207..687908 (+) | 702 | WP_000594579.1 | type II secretion system minor pseudopilin GspJ | Machinery gene |
| DPV67_RS03350 (DPV67_03350) | gspK | 687908..688867 (+) | 960 | WP_072292244.1 | type II secretion system minor pseudopilin GspK | - |
| DPV67_RS03355 (DPV67_03355) | - | 689097..689693 (+) | 597 | WP_000908449.1 | 6-pyruvoyl trahydropterin synthase family protein | - |
| DPV67_RS03360 (DPV67_03360) | ung | 689744..690457 (+) | 714 | WP_001177527.1 | uracil-DNA glycosylase | - |
| DPV67_RS03365 (DPV67_03365) | - | 690454..691578 (+) | 1125 | WP_001983908.1 | enoyl-CoA hydratase/isomerase family protein | - |
| DPV67_RS03370 (DPV67_03370) | tadA | 691585..692088 (+) | 504 | WP_001997771.1 | tRNA adenosine(34) deaminase TadA | - |
Sequence
Protein
Download Length: 126 a.a. Molecular weight: 14074.34 Da Isoelectric Point: 10.0341
>NTDB_id=299249 DPV67_RS03340 WP_000836914.1 686827..687207(+) (xcpV) [Acinetobacter baumannii strain DA33382]
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDPDKRKVQNGITHMVFFNYPVKAK
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDPDKRKVQNGITHMVFFNYPVKAK
Nucleotide
Download Length: 381 bp
>NTDB_id=299249 DPV67_RS03340 WP_000836914.1 686827..687207(+) (xcpV) [Acinetobacter baumannii strain DA33382]
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCTGTCGCAGCTGTCGCTTTAACTAA
AGTGGCAATGCAGTACACTCAGTCCACTTCAAATGCAATTTTGCGAACCAAAGCTCAGTTTGTGGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACTCAAAGTAAGCAAGTAACTTCCCAAGGTGAAACTTGGCAAATC
GATAAGTCAGCTCAATCTACTATTAGCCCGAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAGAG
AAAAGTACAAAATGGCATTACACATATGGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCTGTCGCAGCTGTCGCTTTAACTAA
AGTGGCAATGCAGTACACTCAGTCCACTTCAAATGCAATTTTGCGAACCAAAGCTCAGTTTGTGGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACTCAAAGTAAGCAAGTAACTTCCCAAGGTGAAACTTGGCAAATC
GATAAGTCAGCTCAATCTACTATTAGCCCGAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAGAG
AAAAGTACAAAATGGCATTACACATATGGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| xcpV | Acinetobacter baumannii D1279779 |
99.206 |
100 |
0.992 |