Detailed information
Bioinformatically predicted
Overview
| Name | recR | Type | Machinery gene |
| Locus tag | SPP_RS08325 | Genome accession | NC_012467 |
| Coordinates | 1564788..1565384 (-) | Length | 198 a.a. |
| NCBI ID | WP_000966743.1 | Uniprot ID | P0CB76 |
| Organism | Streptococcus pneumoniae P1031 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Genomic Context
Location: 1559788..1570384
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SPP_RS08305 (SPP_1686) | - | 1560700..1561404 (-) | 705 | WP_001055246.1 | TIGR02206 family membrane protein | - |
| SPP_RS08310 (SPP_1687) | - | 1561495..1562106 (-) | 612 | WP_000857980.1 | NUDIX hydrolase | - |
| SPP_RS08315 (SPP_1688) | murF | 1562093..1563466 (-) | 1374 | WP_000778903.1 | UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase | - |
| SPP_RS08320 (SPP_1689) | - | 1563550..1564593 (-) | 1044 | WP_000814643.1 | D-alanine--D-alanine ligase | - |
| SPP_RS08325 (SPP_1690) | recR | 1564788..1565384 (-) | 597 | WP_000966743.1 | recombination mediator RecR | Machinery gene |
| SPP_RS08330 (SPP_1691) | pbp2b | 1565395..1567452 (-) | 2058 | WP_078065385.1 | penicillin-binding protein 2B | - |
| SPP_RS08335 (SPP_1692) | - | 1567652..1568503 (+) | 852 | WP_000360331.1 | MurR/RpiR family transcriptional regulator | - |
| SPP_RS08340 (SPP_1693) | - | 1568519..1569403 (-) | 885 | WP_000222983.1 | ROK family protein | - |
| SPP_RS08345 (SPP_1694) | - | 1569421..1570338 (-) | 918 | WP_001281525.1 | dihydrodipicolinate synthase family protein | - |
Sequence
Protein
Download Length: 198 a.a. Molecular weight: 21688.86 Da Isoelectric Point: 4.5622
>NTDB_id=29918 SPP_RS08325 WP_000966743.1 1564788..1565384(-) (recR) [Streptococcus pneumoniae P1031]
MLYPTPIAKLIDSYSKLPGIGIKTATRLAFYTIGMSADDVNEFAKNLLSAKRELTYCSICGRLTDDDPCSICTDPTRDQT
TILVLEDSRDVAAMENIQEYHGLYHVLHGLISPMNGISPDDINLKSLMTRLMDSEVSEVIVATNATADGEATSMYLSRLL
KPAGIKVTRLARGLAVGADIEYADEVTLLRAIENRTEL
MLYPTPIAKLIDSYSKLPGIGIKTATRLAFYTIGMSADDVNEFAKNLLSAKRELTYCSICGRLTDDDPCSICTDPTRDQT
TILVLEDSRDVAAMENIQEYHGLYHVLHGLISPMNGISPDDINLKSLMTRLMDSEVSEVIVATNATADGEATSMYLSRLL
KPAGIKVTRLARGLAVGADIEYADEVTLLRAIENRTEL
Nucleotide
Download Length: 597 bp
>NTDB_id=29918 SPP_RS08325 WP_000966743.1 1564788..1565384(-) (recR) [Streptococcus pneumoniae P1031]
ATGCTTTATCCAACACCTATTGCCAAGTTGATTGACAGTTATTCTAAGTTACCAGGTATCGGGATTAAGACGGCTACGCG
TCTGGCCTTTTATACGATTGGGATGTCTGCTGATGATGTCAATGAATTTGCAAAAAATCTCCTTTCTGCTAAGAGAGAAT
TGACATATTGTTCTATTTGTGGACGTTTGACAGACGACGATCCTTGTTCTATCTGTACTGATCCGACTCGTGACCAGACA
ACAATTTTAGTTCTTGAGGATAGTAGAGATGTGGCAGCCATGGAAAATATCCAAGAATACCATGGACTCTATCATGTCCT
TCATGGCCTCATTTCTCCTATGAATGGTATCAGTCCGGACGATATCAATCTCAAGAGCCTTATGACTCGTCTTATGGATA
GTGAGGTTTCAGAAGTGATTGTGGCGACTAATGCTACAGCGGATGGTGAAGCGACTTCCATGTATCTTTCACGTTTGCTC
AAGCCGGCTGGTATCAAGGTTACGCGTCTAGCACGAGGTCTCGCTGTGGGAGCGGACATTGAGTATGCGGACGAAGTGAC
ACTCTTACGAGCGATTGAAAATCGGACAGAGTTGTAA
ATGCTTTATCCAACACCTATTGCCAAGTTGATTGACAGTTATTCTAAGTTACCAGGTATCGGGATTAAGACGGCTACGCG
TCTGGCCTTTTATACGATTGGGATGTCTGCTGATGATGTCAATGAATTTGCAAAAAATCTCCTTTCTGCTAAGAGAGAAT
TGACATATTGTTCTATTTGTGGACGTTTGACAGACGACGATCCTTGTTCTATCTGTACTGATCCGACTCGTGACCAGACA
ACAATTTTAGTTCTTGAGGATAGTAGAGATGTGGCAGCCATGGAAAATATCCAAGAATACCATGGACTCTATCATGTCCT
TCATGGCCTCATTTCTCCTATGAATGGTATCAGTCCGGACGATATCAATCTCAAGAGCCTTATGACTCGTCTTATGGATA
GTGAGGTTTCAGAAGTGATTGTGGCGACTAATGCTACAGCGGATGGTGAAGCGACTTCCATGTATCTTTCACGTTTGCTC
AAGCCGGCTGGTATCAAGGTTACGCGTCTAGCACGAGGTCTCGCTGTGGGAGCGGACATTGAGTATGCGGACGAAGTGAC
ACTCTTACGAGCGATTGAAAATCGGACAGAGTTGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| recR | Streptococcus pneumoniae R6 |
100 |
100 |
1 |
| recR | Bacillus subtilis subsp. subtilis str. 168 |
62.121 |
100 |
0.621 |
| recR | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
49.231 |
98.485 |
0.485 |