Detailed information    

insolico Bioinformatically predicted

Overview

Name   eeP   Type   Regulator
Locus tag   DOU31_RS04150 Genome accession   NZ_CP030042
Coordinates   828155..829423 (+) Length   422 a.a.
NCBI ID   WP_138807076.1    Uniprot ID   -
Organism   Enterococcus faecalis strain C25     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 823155..834423
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DOU31_RS04130 (DOU31_04125) sufU 824231..824698 (+) 468 WP_002356768.1 Fe-S cluster assembly sulfur transfer protein SufU -
  DOU31_RS04135 (DOU31_04130) sufB 824717..826111 (+) 1395 WP_002356769.1 Fe-S cluster assembly protein SufB -
  DOU31_RS04140 (DOU31_04135) - 826272..826874 (-) 603 WP_002393123.1 YczE/YyaS/YitT family protein -
  DOU31_RS04145 (DOU31_04140) - 826960..827739 (-) 780 WP_002359767.1 SDR family oxidoreductase -
  DOU31_RS04150 (DOU31_04145) eeP 828155..829423 (+) 1269 WP_138807076.1 RIP metalloprotease RseP Regulator
  DOU31_RS04155 (DOU31_04150) - 829495..831213 (+) 1719 WP_002372134.1 proline--tRNA ligase -

Sequence

Protein


Download         Length: 422 a.a.        Molecular weight: 46456.37 Da        Isoelectric Point: 6.6651

>NTDB_id=298678 DOU31_RS04150 WP_138807076.1 828155..829423(+) (eeP) [Enterococcus faecalis strain C25]
MKTIITFIIVFGILVLVHEFGHFYFAKRAGILVREFAIGMGPKIFAHRGKDGTTYTIRLLPIGGYVRMAGMGEDMTEITP
GMPLSVELNAVGNVVKINTSKKVQLPHSIPMEVVDFDLEKELFIKGYVNGNEEEETVYKVDHDATIIESDGTEVRIAPLD
VQFQSAKLSQRILTNFAGPMNNFILGFILFTLAVFLQGGVTDLNTNQIGQVIPNGPAAEAGLKENDKVLSINNQKIKKYE
DFTTIVQKNPEKPLTFVVERNGKEEQLTVTPEKQKVEKQTIGKVGVYPYMKTDLPSKLMGGIQDTLNSTTQIFKALGSLF
TGFSLNKLGGPVMMFKLSEEASNAGVSTVVFLTAMLSMNLGIINLLPIPALDGGKIVLNIIEGVRGKPISPEKEGIITLI
GFGFVMVLMVLVTWNDIQRFFF

Nucleotide


Download         Length: 1269 bp        

>NTDB_id=298678 DOU31_RS04150 WP_138807076.1 828155..829423(+) (eeP) [Enterococcus faecalis strain C25]
ATGAAAACAATTATCACATTCATTATTGTCTTCGGTATTCTTGTCCTCGTACATGAATTTGGCCACTTTTATTTTGCAAA
ACGAGCGGGTATTTTAGTTCGTGAGTTTGCAATCGGAATGGGACCAAAGATTTTTGCGCATCGTGGAAAAGATGGCACCA
CTTATACGATTCGCTTATTGCCAATTGGTGGCTATGTGCGAATGGCTGGGATGGGCGAAGACATGACAGAAATCACACCA
GGTATGCCTCTATCTGTTGAGTTAAATGCCGTGGGTAATGTGGTTAAAATTAATACAAGTAAAAAAGTACAATTACCTCA
TAGTATTCCGATGGAAGTCGTTGATTTTGATCTTGAAAAAGAATTATTCATCAAGGGCTATGTCAATGGAAACGAGGAAG
AAGAAACCGTTTATAAAGTTGACCATGATGCAACGATTATTGAAAGTGATGGAACCGAGGTGCGGATTGCGCCACTTGAC
GTTCAATTTCAATCAGCGAAATTATCGCAACGCATTTTGACGAACTTTGCGGGACCCATGAATAACTTTATCTTAGGGTT
TATTCTGTTTACGTTAGCGGTCTTTCTACAAGGAGGCGTTACTGATTTAAACACGAATCAAATTGGACAAGTGATTCCTA
ATGGCCCAGCCGCAGAAGCTGGGTTGAAAGAAAATGATAAAGTCTTATCGATTAATAATCAAAAAATCAAAAAATACGAA
GATTTTACAACCATTGTGCAGAAGAACCCCGAAAAGCCGTTAACGTTCGTAGTTGAGCGTAACGGCAAAGAAGAGCAACT
AACAGTGACACCAGAAAAACAAAAAGTGGAAAAACAAACGATTGGTAAAGTCGGCGTTTATCCTTATATGAAAACCGATT
TACCGTCAAAATTGATGGGCGGTATTCAGGATACTTTAAATAGTACGACACAGATTTTTAAAGCACTCGGCTCACTATTC
ACAGGCTTTAGTTTAAACAAACTAGGTGGGCCAGTCATGATGTTTAAGTTATCGGAAGAAGCATCCAATGCTGGAGTAAG
TACAGTTGTATTCTTAACGGCCATGTTGTCAATGAACTTAGGGATTATTAATTTGTTGCCGATCCCAGCTTTAGATGGCG
GGAAAATTGTCTTAAACATTATTGAAGGTGTACGTGGAAAACCAATTAGTCCTGAAAAAGAAGGCATCATTACGTTAATT
GGCTTTGGGTTTGTCATGGTGTTAATGGTGTTAGTTACTTGGAACGATATTCAACGCTTTTTCTTTTAA

Domains

Predicted by InterproScan.

PDZ domain (PDZ_6)

(208-260)

Peptidase family M50 (Peptidase_M50)

(6-408)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMD-9

53.505

100

0.543
  eeP Streptococcus thermophilus LMG 18311

53.505

100

0.543

Multiple sequence alignment