Detailed information
Bioinformatically predicted
Overview
| Name | comYH | Type | Machinery gene |
| Locus tag | DK877_RS00810 | Genome accession | NZ_CP030023 |
| Coordinates | 126297..127250 (+) | Length | 317 a.a. |
| NCBI ID | WP_024409299.1 | Uniprot ID | A0A7Y6VE95 |
| Organism | Streptococcus suis strain ISU2414 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 121297..132250
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DK877_RS00770 (DK877_00790) | - | 121560..122510 (-) | 951 | WP_002936565.1 | S66 peptidase family protein | - |
| DK877_RS00775 (DK877_00795) | comYA | 122596..123546 (+) | 951 | WP_002936562.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| DK877_RS00780 (DK877_00800) | comYB | 123458..124495 (+) | 1038 | WP_255195823.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| DK877_RS00785 (DK877_00805) | comYC | 124497..124778 (+) | 282 | WP_009909092.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| DK877_RS00790 (DK877_00810) | comGD | 124759..125166 (+) | 408 | WP_009909093.1 | competence type IV pilus minor pilin ComGD | - |
| DK877_RS00795 (DK877_00815) | comYE | 125138..125431 (+) | 294 | WP_024390433.1 | competence type IV pilus minor pilin ComGE | Machinery gene |
| DK877_RS00800 (DK877_00820) | comGF/cglF | 125418..125852 (+) | 435 | WP_009909097.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| DK877_RS00805 (DK877_00825) | comGG | 125830..126240 (+) | 411 | WP_009909099.1 | competence type IV pilus minor pilin ComGG | - |
| DK877_RS00810 (DK877_00830) | comYH | 126297..127250 (+) | 954 | WP_024409299.1 | class I SAM-dependent methyltransferase | Machinery gene |
| DK877_RS00815 (DK877_00835) | - | 127300..128487 (+) | 1188 | WP_013730078.1 | acetate kinase | - |
| DK877_RS00820 (DK877_00845) | - | 128802..129398 (+) | 597 | WP_009909104.1 | folate family ECF transporter S component | - |
| DK877_RS00825 (DK877_00850) | - | 129409..130665 (+) | 1257 | WP_013730079.1 | folylpolyglutamate synthase/dihydrofolate synthase family protein | - |
| DK877_RS00830 (DK877_00855) | pepA | 130711..131772 (-) | 1062 | WP_002936538.1 | glutamyl aminopeptidase | - |
Sequence
Protein
Download Length: 317 a.a. Molecular weight: 35807.97 Da Isoelectric Point: 4.4571
>NTDB_id=298467 DK877_RS00810 WP_024409299.1 126297..127250(+) (comYH) [Streptococcus suis strain ISU2414]
MNFEKIEQAYDLLLENVQTIQNQLGTNIYDAMIEQNAAYVANQHEMDLVVNNNKTLKQLDLTKEEWRRAYQFLLIKANQT
EPMQYNHQFTPDSIGFILSFLVDQLMPTQKVTVLEIGSGTGNLAQTILNASQKELDYLGIEVDDLLIDLSASIADVMQAD
ISFAQGDAVRPQILKESQVILGDLPIGYYPDDQIASRYQVASPNEHTYAHHLLMEQSLKYLEKDGFAILLAPNDLLTSPQ
SDLLKGWLQEQANIVAMIALPPNLFGKAAMAKSIFVLQKKAARSLTPFVYPLQSLQEPEAIQKFMLNFKNWKQENAI
MNFEKIEQAYDLLLENVQTIQNQLGTNIYDAMIEQNAAYVANQHEMDLVVNNNKTLKQLDLTKEEWRRAYQFLLIKANQT
EPMQYNHQFTPDSIGFILSFLVDQLMPTQKVTVLEIGSGTGNLAQTILNASQKELDYLGIEVDDLLIDLSASIADVMQAD
ISFAQGDAVRPQILKESQVILGDLPIGYYPDDQIASRYQVASPNEHTYAHHLLMEQSLKYLEKDGFAILLAPNDLLTSPQ
SDLLKGWLQEQANIVAMIALPPNLFGKAAMAKSIFVLQKKAARSLTPFVYPLQSLQEPEAIQKFMLNFKNWKQENAI
Nucleotide
Download Length: 954 bp
>NTDB_id=298467 DK877_RS00810 WP_024409299.1 126297..127250(+) (comYH) [Streptococcus suis strain ISU2414]
ATGAATTTTGAAAAGATCGAACAGGCTTACGACCTGCTATTAGAAAACGTACAGACTATCCAAAACCAGCTAGGTACCAA
TATCTATGATGCCATGATTGAGCAAAATGCTGCTTACGTAGCTAATCAGCATGAGATGGACCTTGTTGTCAATAATAACA
AGACCTTGAAACAACTAGATTTAACCAAGGAAGAATGGCGTCGTGCCTATCAATTCTTGCTCATCAAGGCCAATCAGACT
GAACCCATGCAGTACAATCACCAGTTCACACCAGACTCTATCGGATTTATCCTATCTTTTCTAGTAGACCAATTGATGCC
GACTCAAAAGGTGACGGTTCTGGAAATTGGTTCGGGGACAGGCAATCTAGCTCAGACCATTCTCAACGCCAGCCAGAAAG
AATTGGATTACTTGGGGATCGAAGTGGACGACCTCTTGATTGATTTGTCGGCAAGTATTGCGGATGTCATGCAGGCAGAT
ATTTCTTTTGCTCAGGGAGATGCGGTACGTCCGCAGATTTTGAAGGAAAGTCAAGTAATTTTGGGAGATTTGCCTATTGG
CTACTATCCAGATGACCAGATTGCTAGCCGCTATCAGGTCGCCAGCCCAAATGAACATACCTACGCCCATCATTTACTCA
TGGAACAATCCCTGAAATATCTGGAAAAAGATGGCTTTGCGATTTTGTTGGCTCCAAATGATTTATTGACTAGTCCGCAA
AGCGATTTGCTGAAAGGTTGGTTACAGGAGCAAGCCAATATTGTTGCCATGATTGCCCTGCCACCAAATCTCTTTGGGAA
GGCTGCTATGGCCAAGTCTATTTTTGTCTTGCAAAAGAAAGCTGCAAGATCGTTGACGCCGTTTGTTTATCCCTTACAAA
GTCTTCAAGAACCAGAAGCTATTCAGAAGTTCATGCTCAATTTCAAAAATTGGAAGCAAGAGAATGCAATTTAA
ATGAATTTTGAAAAGATCGAACAGGCTTACGACCTGCTATTAGAAAACGTACAGACTATCCAAAACCAGCTAGGTACCAA
TATCTATGATGCCATGATTGAGCAAAATGCTGCTTACGTAGCTAATCAGCATGAGATGGACCTTGTTGTCAATAATAACA
AGACCTTGAAACAACTAGATTTAACCAAGGAAGAATGGCGTCGTGCCTATCAATTCTTGCTCATCAAGGCCAATCAGACT
GAACCCATGCAGTACAATCACCAGTTCACACCAGACTCTATCGGATTTATCCTATCTTTTCTAGTAGACCAATTGATGCC
GACTCAAAAGGTGACGGTTCTGGAAATTGGTTCGGGGACAGGCAATCTAGCTCAGACCATTCTCAACGCCAGCCAGAAAG
AATTGGATTACTTGGGGATCGAAGTGGACGACCTCTTGATTGATTTGTCGGCAAGTATTGCGGATGTCATGCAGGCAGAT
ATTTCTTTTGCTCAGGGAGATGCGGTACGTCCGCAGATTTTGAAGGAAAGTCAAGTAATTTTGGGAGATTTGCCTATTGG
CTACTATCCAGATGACCAGATTGCTAGCCGCTATCAGGTCGCCAGCCCAAATGAACATACCTACGCCCATCATTTACTCA
TGGAACAATCCCTGAAATATCTGGAAAAAGATGGCTTTGCGATTTTGTTGGCTCCAAATGATTTATTGACTAGTCCGCAA
AGCGATTTGCTGAAAGGTTGGTTACAGGAGCAAGCCAATATTGTTGCCATGATTGCCCTGCCACCAAATCTCTTTGGGAA
GGCTGCTATGGCCAAGTCTATTTTTGTCTTGCAAAAGAAAGCTGCAAGATCGTTGACGCCGTTTGTTTATCCCTTACAAA
GTCTTCAAGAACCAGAAGCTATTCAGAAGTTCATGCTCAATTTCAAAAATTGGAAGCAAGAGAATGCAATTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comYH | Streptococcus mutans UA140 |
60.759 |
99.685 |
0.606 |
| comYH | Streptococcus mutans UA159 |
60.443 |
99.685 |
0.603 |