Detailed information NTG0029846

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: APJL_RS08805
• Genome accession: NC_010278
• Coordinates: 1904844..1905998 (+)
• Length: 384 a.a.
• NCBI ID: WP_012263362.1
• Uniprot ID: -
• Organism: Actinobacillus pleuropneumoniae serovar 3 str. JL03
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 1899844..1910998

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
APJL_RS08785 (APJL_1740)	-	1900117..1901466 (+)	1350	WP_012263360.1	Slam-dependent surface lipoprotein	-
APJL_RS08790 (APJL_1741)	-	1901775..1903019 (+)	1245	WP_005619359.1	surface lipoprotein assembly modifier	-
APJL_RS08795 (APJL_1742)	rfaD	1903080..1904006 (-)	927	WP_005599195.1	ADP-glyceromanno-heptose 6-epimerase	-
APJL_RS08800 (APJL_1743)	def	1904146..1904658 (-)	513	WP_005599196.1	peptide deformylase	-
APJL_RS08805 (APJL_1744)	dprA	1904844..1905998 (+)	1155	WP_012263362.1	DNA-processing protein DprA	Machinery gene
APJL_RS08810 (APJL_1745)	-	1906042..1908048 (-)	2007	WP_012263363.1	OPT family oligopeptide transporter	-
APJL_RS08815 (APJL_1747)	-	1908269..1909624 (-)	1356	WP_012263365.1	PTS ascorbate transporter subunit IIC	-
APJL_RS08820 (APJL_1748)	-	1909633..1909905 (-)	273	WP_005599206.1	PTS sugar transporter subunit IIB	-
APJL_RS08825 (APJL_1749)	secE	1910208..1910621 (+)	414	WP_005599209.1	preprotein translocase subunit SecE	-

Sequence

Protein

• Length: 384 a.a.
• Molecular weight: 42845.27 Da
• Isoelectric Point: 5.8811

>NTDB_id=29846 APJL_RS08805 WP_012263362.1 1904844..1905998(+) (dprA) [Actinobacillus pleuropneumoniae serovar 3 str. JL03]
MSQADLLKLLQIPQLGAQRIARLLSEVDFAQFCQYDKRQLQQIGWNEKQIQRWFNPEMRWIDNALTWAERPNQHLLSLFD
EEYPFLLRQISIAPPVLFVRGSLSSLSLPQIAIVGSRDFSAYGEYWAGYFSEQLVKHHLAVTSGLAIGIDGFCHQRAVAE
QGITIAVLGSGLDQVYPARHKKLAEQIVESGGALVSEFFPNQPPLAENFPRRNRIISGLSLGTLVVEATVNSGSLITARY
ALEQGREVFALPNSVQNPYAQGCHKLIKEGALLTETIEDILQAIQYQLPSQPRQQVLFEPEQAVEKAPFFAKVDMPNKVT
HLAKKLPELTACQQQIVAHISLEPISIDDLAKATSLEVETLLVELLGLELLSVIKQVSGGYVRQ

Nucleotide

• Length: 1155 bp

>NTDB_id=29846 APJL_RS08805 WP_012263362.1 1904844..1905998(+) (dprA) [Actinobacillus pleuropneumoniae serovar 3 str. JL03]
ATGTCTCAGGCTGATTTACTGAAATTATTGCAGATTCCGCAACTGGGGGCGCAGCGCATTGCTCGTCTGTTATCCGAAGT
GGATTTTGCCCAATTTTGCCAATATGACAAACGCCAATTACAACAAATTGGTTGGAACGAGAAACAGATTCAACGCTGGT
TCAATCCGGAAATGCGTTGGATTGATAATGCTCTCACGTGGGCGGAGCGGCCGAATCAACACTTATTGAGCTTATTTGAT
GAGGAATATCCGTTTTTATTACGGCAAATCAGCATCGCACCGCCAGTGTTATTTGTGCGAGGTTCGCTAAGTAGTTTGAG
CTTACCGCAAATTGCGATTGTCGGTAGTCGAGACTTTTCCGCCTACGGAGAATACTGGGCGGGCTATTTTAGCGAGCAAT
TGGTTAAACATCATTTGGCGGTTACTAGCGGACTTGCAATCGGCATAGACGGTTTTTGCCATCAGCGAGCGGTAGCGGAA
CAGGGTATTACGATTGCTGTGTTGGGCAGCGGTTTAGATCAAGTCTATCCGGCAAGGCACAAAAAATTGGCGGAGCAAAT
TGTCGAAAGCGGCGGGGCGTTAGTGTCGGAATTTTTTCCGAATCAACCGCCGCTTGCCGAGAATTTCCCGCGTCGTAATC
GGATTATCAGCGGTTTATCGCTTGGCACATTAGTGGTTGAAGCTACGGTGAATAGCGGTTCGCTGATTACCGCCCGTTAT
GCGTTGGAGCAAGGGCGAGAAGTTTTTGCGTTACCGAATTCGGTACAAAATCCGTATGCACAAGGCTGTCATAAACTGAT
AAAAGAAGGGGCTCTTTTAACTGAGACGATAGAGGATATTTTGCAAGCGATTCAATATCAACTGCCGAGTCAGCCTCGGC
AACAGGTGCTGTTTGAGCCGGAACAAGCGGTCGAAAAAGCCCCATTTTTTGCAAAAGTCGATATGCCGAATAAGGTCACT
CATCTTGCAAAAAAATTGCCGGAATTGACCGCTTGTCAGCAACAAATTGTGGCGCATATTAGTCTTGAACCGATTTCGAT
TGACGATTTGGCTAAGGCGACTTCATTGGAGGTGGAAACACTGTTAGTCGAGTTACTGGGTTTGGAATTATTAAGTGTGA
TTAAGCAGGTAAGCGGCGGTTATGTCAGACAATAA

Domains

Predicted by InterproScan.

• DprA winged helix domain (DprA_WH) (324-380)

• DNA recombination-mediator protein A (DNA_processg_A) (69-273)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Glaesserella parasuis strain SC1401	75.989	98.698	0.75
dprA	Vibrio campbellii strain DS40M4	46.579	98.958	0.461
dprA	Haemophilus influenzae Rd KW20	49.28	90.365	0.445
dprA	Vibrio cholerae strain A1552	42.119	100	0.424
dprA	Legionella pneumophila strain ERS1305867	37.598	99.74	0.375