Detailed information
Bioinformatically predicted
Overview
| Name | comEA/comE1 | Type | Machinery gene |
| Locus tag | APJL_RS07165 | Genome accession | NC_010278 |
| Coordinates | 1571602..1571946 (+) | Length | 114 a.a. |
| NCBI ID | WP_012263215.1 | Uniprot ID | B0BR00 |
| Organism | Actinobacillus pleuropneumoniae serovar 3 str. JL03 | ||
| Function | dsDNA binding (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1566602..1576946
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| APJL_RS07140 (APJL_1426) | rpsL | 1566735..1567109 (-) | 375 | WP_005543325.1 | 30S ribosomal protein S12 | - |
| APJL_RS07145 (APJL_1427) | rfaC | 1567231..1568190 (-) | 960 | WP_012263212.1 | lipopolysaccharide heptosyltransferase RfaC | - |
| APJL_RS07150 (APJL_1428) | waaF | 1568265..1569302 (-) | 1038 | WP_012263213.1 | lipopolysaccharide heptosyltransferase II | - |
| APJL_RS07155 (APJL_1429) | - | 1569384..1569788 (-) | 405 | WP_005599908.1 | MliC family protein | - |
| APJL_RS07160 (APJL_1430) | - | 1569910..1571301 (-) | 1392 | WP_005605242.1 | LysM-like peptidoglycan-binding domain-containing protein | - |
| APJL_RS07165 (APJL_1431) | comEA/comE1 | 1571602..1571946 (+) | 345 | WP_012263215.1 | ComEA family DNA-binding protein | Machinery gene |
| APJL_RS07170 (APJL_1432) | asd | 1572097..1572987 (+) | 891 | WP_005602033.1 | archaetidylserine decarboxylase | - |
| APJL_RS07175 (APJL_1433) | hsdR | 1573104..1575446 (+) | 2343 | WP_012263216.1 | EcoAI/FtnUII family type I restriction enzme subunit R | - |
Sequence
Protein
Download Length: 114 a.a. Molecular weight: 12460.33 Da Isoelectric Point: 10.2030
>NTDB_id=29842 APJL_RS07165 WP_012263215.1 1571602..1571946(+) (comEA/comE1) [Actinobacillus pleuropneumoniae serovar 3 str. JL03]
MKKFARFSISFIIALLSADSIAKPNNPPVSEPTPIVQQMTTTNKTADKQNQVNINTADAAEIKSKLVGIGEKKAQAIVDY
RTKNGAFITIEQLTEVSGIGKATLEKNRERITLE
MKKFARFSISFIIALLSADSIAKPNNPPVSEPTPIVQQMTTTNKTADKQNQVNINTADAAEIKSKLVGIGEKKAQAIVDY
RTKNGAFITIEQLTEVSGIGKATLEKNRERITLE
Nucleotide
Download Length: 345 bp
>NTDB_id=29842 APJL_RS07165 WP_012263215.1 1571602..1571946(+) (comEA/comE1) [Actinobacillus pleuropneumoniae serovar 3 str. JL03]
ATGAAAAAATTTGCCCGATTTAGTATTAGCTTCATCATTGCATTGTTATCCGCCGATTCAATCGCAAAGCCTAATAATCC
GCCCGTTTCCGAACCGACTCCCATAGTTCAACAAATGACAACAACGAACAAAACTGCCGATAAACAAAATCAAGTGAATA
TCAATACGGCGGATGCAGCGGAAATTAAATCCAAACTGGTGGGAATCGGTGAGAAAAAAGCACAAGCGATTGTCGATTAC
CGCACTAAAAACGGTGCTTTTATTACGATAGAACAACTAACGGAAGTCTCCGGAATCGGTAAAGCGACACTAGAGAAAAA
TCGCGAACGCATCACGTTAGAATAA
ATGAAAAAATTTGCCCGATTTAGTATTAGCTTCATCATTGCATTGTTATCCGCCGATTCAATCGCAAAGCCTAATAATCC
GCCCGTTTCCGAACCGACTCCCATAGTTCAACAAATGACAACAACGAACAAAACTGCCGATAAACAAAATCAAGTGAATA
TCAATACGGCGGATGCAGCGGAAATTAAATCCAAACTGGTGGGAATCGGTGAGAAAAAAGCACAAGCGATTGTCGATTAC
CGCACTAAAAACGGTGCTTTTATTACGATAGAACAACTAACGGAAGTCTCCGGAATCGGTAAAGCGACACTAGAGAAAAA
TCGCGAACGCATCACGTTAGAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comEA/comE1 | Glaesserella parasuis strain SC1401 |
57.391 |
100 |
0.579 |
| comE1/comEA | Haemophilus influenzae Rd KW20 |
46.154 |
91.228 |
0.421 |