Detailed information    

insolico Bioinformatically predicted

Overview


Name   eeP   Type   Regulator
Locus tag   A7J09_RS01040 Genome accession   NZ_CP030015
Coordinates   190128..191387 (+) Length   419 a.a.
NCBI ID   WP_029175092.1    Uniprot ID   -
Organism   Streptococcus suis strain ISU2812     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 185128..196387
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  A7J09_RS01020 - 187380..187439 (+) 60 WP_418871923.1 hypothetical protein -
  A7J09_RS01025 (A7J09_01040) - 187723..188315 (-) 593 Protein_168 IS66 family transposase -
  A7J09_RS01030 (A7J09_01045) - 188547..189302 (+) 756 WP_029175090.1 isoprenyl transferase -
  A7J09_RS01035 (A7J09_01050) - 189312..190118 (+) 807 WP_029175091.1 phosphatidate cytidylyltransferase -
  A7J09_RS01040 (A7J09_01055) eeP 190128..191387 (+) 1260 WP_029175092.1 RIP metalloprotease RseP Regulator
  A7J09_RS01045 (A7J09_01060) - 191710..193563 (+) 1854 WP_053861610.1 proline--tRNA ligase -
  A7J09_RS01050 (A7J09_01065) dhaM 193609..193983 (-) 375 WP_029175094.1 dihydroxyacetone kinase phosphoryl donor subunit DhaM -
  A7J09_RS01055 (A7J09_01070) dhaL 193980..194555 (-) 576 WP_029178659.1 dihydroxyacetone kinase subunit DhaL -
  A7J09_RS01060 (A7J09_01075) dhaK 194566..195555 (-) 990 WP_024386768.1 dihydroxyacetone kinase subunit DhaK -
  A7J09_RS01065 (A7J09_01080) dhaS 195703..196119 (+) 417 Protein_176 dihydroxyacetone kinase transcriptional activator DhaS -

Sequence


Protein


Download         Length: 419 a.a.        Molecular weight: 44942.32 Da        Isoelectric Point: 5.9847

>NTDB_id=298249 A7J09_RS01040 WP_029175092.1 190128..191387(+) (eeP) [Streptococcus suis strain ISU2812]
MKGILAFIFIFGVIVVVHEFGHFYFAKKAGILVREFAIGMGPKIFAHTGKDGTLYTIRILPLGGYVRMAGWGEDKTEIKT
GSPASLRLNEAGVVTRINLSGKQLDSLSLPMNVTSFDFEEKLEITGLVLEESKTYKVDHDATIVEEDGTEVRIAPLDVQY
QNATVWGRLMTNFAGPMNNFILGILIFILLFFMQGGVANPSSNAVSIAEGGALQAAGVVTGDKILSVNGNTTDSYTEVAT
IISKAATDATTAPSFDLVVEHDGKNRHVSVTAEQVDGAYRIGISPILKTGFVDKIVGGFQEAGATALRVVTALKNLIANF
DVKQLGGPVAIYKVSSQAAEFGLVSVLGLMAALSINLGIFNLIPIPALDGGKIVMNILEAIRRKPLKPETESYITLAGVA
VMVVLMIVVTWNDIIRVFF

Nucleotide


Download         Length: 1260 bp        

>NTDB_id=298249 A7J09_RS01040 WP_029175092.1 190128..191387(+) (eeP) [Streptococcus suis strain ISU2812]
ATGAAGGGAATTTTAGCATTTATATTTATATTTGGTGTGATTGTGGTTGTCCATGAATTTGGTCATTTCTACTTTGCCAA
GAAAGCTGGTATCCTTGTGAGGGAATTTGCGATTGGGATGGGTCCCAAAATTTTCGCTCATACAGGTAAGGATGGGACAC
TTTACACCATCCGTATCCTTCCCCTAGGTGGCTATGTTCGAATGGCTGGATGGGGTGAAGATAAGACAGAGATTAAGACA
GGTAGTCCTGCCAGCCTCAGACTGAATGAAGCTGGTGTAGTGACGCGGATTAATTTATCTGGTAAGCAACTGGATAGTCT
CAGTTTGCCAATGAATGTAACCAGTTTTGACTTCGAGGAAAAATTGGAAATCACAGGCTTGGTCTTGGAAGAAAGCAAGA
CCTATAAGGTTGATCACGATGCCACGATTGTAGAGGAAGATGGAACAGAAGTTCGGATTGCTCCACTTGATGTTCAGTAT
CAAAATGCGACAGTCTGGGGACGGTTGATGACCAACTTTGCGGGTCCCATGAATAACTTTATTTTAGGAATTCTAATATT
TATTCTTTTGTTCTTCATGCAAGGCGGGGTTGCCAACCCATCAAGCAATGCAGTAAGTATTGCTGAAGGTGGTGCTTTGC
AGGCTGCGGGTGTTGTCACAGGGGACAAGATTCTTTCGGTCAATGGGAACACGACAGATAGCTACACAGAAGTTGCAACG
ATTATTAGCAAAGCAGCGACAGATGCAACAACAGCCCCAAGCTTTGATTTGGTTGTTGAGCATGATGGGAAAAACCGTCA
TGTCTCCGTTACTGCCGAACAAGTAGATGGGGCCTATCGAATTGGTATTTCACCGATTTTGAAAACTGGTTTCGTTGATA
AAATTGTCGGTGGTTTCCAAGAAGCGGGAGCGACAGCTCTTAGGGTTGTAACAGCCTTGAAGAACCTAATTGCAAACTTT
GATGTTAAGCAGTTGGGGGGACCGGTTGCTATTTATAAAGTAAGTTCTCAAGCGGCTGAATTTGGTTTGGTCTCTGTGTT
GGGGCTGATGGCTGCGCTCTCCATTAACCTTGGAATCTTCAATTTGATTCCAATTCCAGCCTTGGATGGTGGTAAGATTG
TTATGAATATTCTGGAAGCCATTCGCAGAAAACCACTCAAACCAGAGACGGAATCTTATATCACTCTAGCAGGTGTAGCC
GTTATGGTGGTTCTTATGATAGTAGTCACTTGGAATGATATTATAAGAGTCTTCTTCTAA

Domains


Predicted by InterproScan.

(6-405)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMD-9

65

100

0.652

  eeP Streptococcus thermophilus LMG 18311

65

100

0.652


Multiple sequence alignment