Detailed information NTG0298155

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: ESP48_RS05050
• Genome accession: NZ_CP035306
• Coordinates: 938414..939514 (+)
• Length: 366 a.a.
• NCBI ID: WP_024704278.1
• Uniprot ID: -
• Organism: Streptococcus thermophilus strain IDCC2201
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 933414..944514

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ESP48_RS05025 (ESP48_05025)	pgsA	933956..934498 (-)	543	WP_002947777.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-
ESP48_RS05030 (ESP48_05030)	-	934511..935368 (-)	858	WP_014608803.1	helix-turn-helix domain-containing protein	-
ESP48_RS05035 (ESP48_05035)	yfmH	935427..936704 (-)	1278	WP_011226704.1	EF-P 5-aminopentanol modification-associated protein YfmH	-
ESP48_RS05040 (ESP48_05040)	yfmF	936706..937956 (-)	1251	WP_064355698.1	EF-P 5-aminopentanol modification-associated protein YfmF	-
ESP48_RS05045 (ESP48_05045)	yaaA	938034..938411 (+)	378	WP_064355696.1	S4 domain-containing protein YaaA	-
ESP48_RS05050 (ESP48_05050)	recF	938414..939514 (+)	1101	WP_024704278.1	DNA replication/repair protein RecF	Machinery gene
ESP48_RS05055 (ESP48_05055)	guaB	939683..941164 (-)	1482	WP_011227627.1	IMP dehydrogenase	-
ESP48_RS05060 (ESP48_05060)	trpS	941341..942363 (-)	1023	WP_011681763.1	tryptophan--tRNA ligase	-
ESP48_RS05065 (ESP48_05065)	-	942791..943663 (+)	873	WP_064355694.1	YitT family protein	-

Sequence

Protein

• Length: 366 a.a.
• Molecular weight: 42172.35 Da
• Isoelectric Point: 9.2442

>NTDB_id=298155 ESP48_RS05050 WP_024704278.1 938414..939514(+) (recF) [Streptococcus thermophilus strain IDCC2201]
MWLKKIDIQHFRNYSEASVSFSPHLNIFLGRNAQGKTNILEAIYFLALTRSHRTHLDKELIQFQQNSLKLNGIVHRHSGN
LPLEINLSNKGRVTKVNYLKQAKLSDYIGHMTVVLFAPEDLQLVKGSPSLRRKFIDIDLGQIKPVYLSDLSNYNHVLKQR
NAYLKSTDKVDINFLSVLDEQLADFGARVIKHRLEFIKQLEEEADGHHSILSNQIERLKISYESNIPIQNSKDIREAFLT
TLNQNHKRDIFKKNTGVGPHRDDLKFYINDMNASFGSQGQQRSLILSLKMAEIALIKKVTEEFPILLLDDVMSELDNHRQ
LKLLESIDEEVQTFMTTTSLDHLSNLPPNLKTFLVKNGTIYEKQVD

Nucleotide

• Length: 1101 bp

>NTDB_id=298155 ESP48_RS05050 WP_024704278.1 938414..939514(+) (recF) [Streptococcus thermophilus strain IDCC2201]
ATGTGGCTTAAAAAAATTGATATTCAACACTTTAGAAATTATTCTGAAGCCTCTGTGAGCTTTTCACCACATCTCAATAT
TTTTCTTGGACGAAATGCCCAAGGAAAAACAAATATTCTTGAAGCTATCTATTTTCTAGCCTTAACACGTAGTCATCGGA
CCCATTTAGACAAGGAACTAATTCAGTTCCAGCAAAATAGTCTTAAACTAAACGGCATCGTGCATCGTCATAGTGGAAAC
CTACCTCTGGAAATCAACTTATCTAATAAGGGACGAGTTACAAAGGTCAACTACCTCAAGCAGGCAAAATTATCTGATTA
TATAGGTCACATGACGGTGGTACTCTTTGCTCCTGAGGATTTACAACTTGTAAAAGGATCTCCAAGTCTAAGACGTAAAT
TTATAGATATTGATTTAGGACAGATTAAGCCTGTTTACCTCTCAGACCTATCAAATTACAATCATGTTCTTAAGCAGCGT
AATGCCTATCTCAAATCTACTGACAAGGTAGACATTAATTTCCTCTCAGTTTTAGATGAACAGCTTGCCGATTTTGGAGC
ACGAGTTATTAAACATAGACTAGAATTTATCAAGCAATTAGAAGAGGAAGCTGATGGACATCATAGTATTCTCTCAAATC
AGATTGAGCGTCTTAAAATTTCCTATGAATCTAACATCCCAATACAAAATAGCAAAGATATTCGAGAAGCATTTTTAACT
ACATTAAACCAGAATCACAAAAGAGATATCTTCAAAAAGAATACCGGTGTTGGTCCACATAGGGATGATTTAAAATTTTA
CATTAATGACATGAACGCATCTTTCGGTAGTCAAGGGCAGCAACGTAGCCTTATTCTTTCATTAAAAATGGCTGAGATTG
CTCTAATTAAAAAAGTGACAGAGGAATTTCCTATTCTTCTCCTTGACGATGTCATGAGTGAACTTGACAATCACCGTCAA
CTTAAATTGCTAGAAAGTATTGATGAAGAGGTCCAAACTTTCATGACGACAACCTCACTCGATCATCTTAGCAACCTACC
ACCCAATTTAAAGACCTTCTTAGTTAAGAATGGTACTATTTATGAAAAGCAAGTCGATTAA

Domains

Predicted by InterProScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (3-358)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Streptococcus pneumoniae R6	65.642	97.814	0.642
recF	Bacillus subtilis subsp. subtilis str. 168	42.935	100	0.432