Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0A   Type   Regulator
Locus tag   BCERKBAB4_RS20195 Genome accession   NC_010184
Coordinates   4045946..4046740 (-) Length   264 a.a.
NCBI ID   WP_002015081.1    Uniprot ID   R8I3Q7
Organism   Bacillus mycoides KBAB4     
Function   activation and repression of comK; repression of rok; repression of abrB (predicted from homology)   
Competence regulation

Genomic Context

Location: 4040946..4051740
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BCERKBAB4_RS30185 (BcerKBAB4_4016) - 4041273..4041699 (-) 427 Protein_4047 hypothetical protein -
  BCERKBAB4_RS20165 (BcerKBAB4_4017) - 4041702..4041977 (-) 276 Protein_4048 SMI1/KNR4 family protein -
  BCERKBAB4_RS20170 (BcerKBAB4_4018) - 4041996..4042448 (-) 453 WP_002033951.1 YrhA family protein -
  BCERKBAB4_RS20175 (BcerKBAB4_4019) - 4042653..4043126 (-) 474 WP_012261694.1 SMI1/KNR4 family protein -
  BCERKBAB4_RS20180 (BcerKBAB4_4020) - 4043150..4044373 (-) 1224 WP_002033949.1 WXG100 family type VII secretion target -
  BCERKBAB4_RS20185 (BcerKBAB4_4021) - 4044538..4045215 (-) 678 WP_012261695.1 hypothetical protein -
  BCERKBAB4_RS20195 (BcerKBAB4_4023) spo0A 4045946..4046740 (-) 795 WP_002015081.1 sporulation transcription factor Spo0A Regulator
  BCERKBAB4_RS20200 (BcerKBAB4_4025) spoIVB 4047027..4048319 (-) 1293 WP_002015079.1 SpoIVB peptidase -
  BCERKBAB4_RS20205 (BcerKBAB4_4026) recN 4048439..4050178 (-) 1740 WP_002088564.1 DNA repair protein RecN Machinery gene
  BCERKBAB4_RS20210 (BcerKBAB4_4027) argR 4050449..4050898 (-) 450 WP_002015076.1 arginine repressor ArgR -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 29525.32 Da        Isoelectric Point: 7.1180

>NTDB_id=29801 BCERKBAB4_RS20195 WP_002015081.1 4045946..4046740(-) (spo0A) [Bacillus mycoides KBAB4]
MEKIKVCLVDDNKELVSMLESYVAAQDDMEVIGIAYNGQECLNLLKEKQPDILVLDIIMPHLDGLAVLEKMRHIERLRQP
SVIMLTAFGQEDVTKKAVDLGASYFILKPFDMENLTSHIRQVSGKESATIKRPLPSFRSATTIDGKPKNLDASITSIIHE
IGVPAHIKGYMYLREAISMVYNDIELLGSITKVLYPDIAKKYNTTASRVERAIRHAIEVAWSRGNIDSISSLFGYTVSMS
KAKPTNSEFIAMVADKLRLEHKAS

Nucleotide


Download         Length: 795 bp        

>NTDB_id=29801 BCERKBAB4_RS20195 WP_002015081.1 4045946..4046740(-) (spo0A) [Bacillus mycoides KBAB4]
GTGGAGAAAATTAAAGTATGTCTTGTGGATGATAATAAAGAATTGGTATCGATGCTAGAGAGTTATGTTGCTGCCCAAGA
TGATATGGAAGTTATCGGAATTGCTTACAATGGTCAAGAATGTTTAAACTTATTGAAAGAAAAGCAGCCTGATATACTCG
TTTTAGACATTATTATGCCACATTTAGATGGTCTAGCTGTGCTAGAGAAAATGCGACATATTGAAAGGTTAAGACAACCT
AGCGTTATTATGTTGACAGCATTCGGACAAGAAGATGTGACGAAAAAAGCGGTTGATTTAGGGGCATCATATTTCATATT
AAAACCATTTGATATGGAGAATTTAACAAGTCATATTCGTCAAGTTAGTGGTAAGGAAAGTGCTACTATTAAACGTCCAT
TACCATCTTTCCGATCAGCAACAACGATAGATGGAAAACCGAAAAACTTAGATGCGAGTATTACAAGTATCATTCATGAA
ATTGGTGTACCCGCTCATATTAAAGGGTACATGTACTTACGAGAAGCAATCTCTATGGTGTACAATGATATCGAATTACT
AGGATCTATTACGAAAGTATTATATCCAGATATTGCAAAGAAATATAATACAACAGCAAGCCGTGTCGAGCGCGCAATCC
GTCACGCAATTGAAGTAGCTTGGAGCCGTGGGAATATTGATTCTATTTCGTCCTTATTTGGTTATACTGTATCCATGTCA
AAAGCAAAACCTACGAATTCCGAGTTCATCGCAATGGTTGCGGATAAGCTAAGACTTGAACATAAGGCTTCGTAA

Domains

Predicted by InterproScan.

Sporulation initiation factor Spo0A C terminal (Spo0A_C)

(154-257)

Response regulator receiver domain (Response_reg)

(6-119)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB R8I3Q7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0A Bacillus subtilis subsp. subtilis str. 168

80.899

100

0.818

Multiple sequence alignment