Detailed information    

insolico Bioinformatically predicted

Overview

Name   eeP   Type   Regulator
Locus tag   C0W45_RS03905 Genome accession   NZ_CP029966
Coordinates   738639..739910 (+) Length   423 a.a.
NCBI ID   WP_111447579.1    Uniprot ID   -
Organism   Latilactobacillus curvatus strain ZJUNIT8     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 733639..744910
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C0W45_RS03890 (C0W45_03890) - 733758..736310 (-) 2553 WP_420897175.1 YhgE/Pip family protein -
  C0W45_RS10620 - 736320..736505 (-) 186 WP_239494208.1 hypothetical protein -
  C0W45_RS03895 (C0W45_03895) - 736819..737571 (+) 753 WP_004265407.1 isoprenyl transferase -
  C0W45_RS03900 (C0W45_03900) - 737586..738374 (+) 789 WP_004270081.1 phosphatidate cytidylyltransferase -
  C0W45_RS03905 (C0W45_03905) eeP 738639..739910 (+) 1272 WP_111447579.1 RIP metalloprotease RseP Regulator
  C0W45_RS03910 (C0W45_03910) - 739936..741657 (+) 1722 WP_111447580.1 proline--tRNA ligase -

Sequence

Protein


Download         Length: 423 a.a.        Molecular weight: 46139.92 Da        Isoelectric Point: 9.8239

>NTDB_id=297961 C0W45_RS03905 WP_111447579.1 738639..739910(+) (eeP) [Latilactobacillus curvatus strain ZJUNIT8]
MAAIIAFIIIFGILVVVHEFGHFYMAKRSGILVREFSIGMGPKLFATRKNGTTYTIRWLPLGGYVRMAGMADDESEIEAG
TQATLLLDEQETVQKINTSDKVTTLNGVPFQIVKTDLQKELWIEGYESGDESELKRYSVSHDATIVESDGTEVQIAPVDV
QFQSASLINRMLTNFAGPFNNFILAIVAFALFAFLNGGVPQNKAIVGTVMPNSPAQKAGLKMDDRLVKVAGKKVTTFTDF
SSVIAKYPNKPVNVQVKRAKQTKSLEITPKAVKVEGQKGKVGQIGVTAELNHSVGAKLKYGFTQSWANATQIFKILGSFL
TGGFSLNKLAGPVGMYSMTTQFASQGFTMLVYFLAFLSVNLGIMNLIPIPVLDGGKLVINVIEAIRGKPISPEKEGIVTL
VGVGMMVVLMVLVTWNDIQRFFF

Nucleotide


Download         Length: 1272 bp        

>NTDB_id=297961 C0W45_RS03905 WP_111447579.1 738639..739910(+) (eeP) [Latilactobacillus curvatus strain ZJUNIT8]
TTGGCGGCGATTATTGCGTTTATTATCATATTTGGCATTTTAGTAGTGGTGCATGAATTTGGCCACTTTTACATGGCGAA
ACGTTCTGGTATTTTGGTGCGTGAATTTTCAATTGGCATGGGGCCAAAATTATTTGCAACGCGCAAAAATGGCACGACTT
ATACGATTCGTTGGTTACCACTTGGCGGCTATGTCCGCATGGCGGGGATGGCGGATGATGAATCTGAAATCGAAGCCGGC
ACGCAAGCAACCTTGCTGTTAGACGAACAAGAAACTGTTCAAAAAATTAATACAAGTGACAAAGTAACCACGTTAAACGG
TGTCCCATTTCAAATTGTAAAAACTGACTTGCAAAAAGAATTATGGATTGAAGGCTATGAAAGTGGTGACGAATCCGAAT
TAAAGCGTTATTCGGTCAGTCACGATGCAACGATTGTTGAATCAGACGGAACGGAAGTGCAAATCGCACCCGTGGATGTT
CAATTCCAGTCGGCTAGTTTAATCAATCGGATGTTGACCAACTTCGCAGGACCGTTCAACAACTTTATCCTTGCGATTGT
GGCGTTTGCGCTCTTTGCTTTTTTAAACGGTGGCGTCCCACAAAACAAAGCGATTGTTGGCACAGTGATGCCAAACTCGC
CAGCACAAAAAGCCGGGCTTAAAATGGATGACCGGTTAGTGAAAGTTGCTGGCAAAAAAGTCACGACGTTTACTGATTTC
AGCTCGGTGATTGCAAAATATCCGAATAAACCAGTGAATGTCCAGGTTAAACGGGCAAAGCAAACTAAGTCACTCGAAAT
CACACCTAAAGCGGTGAAAGTCGAGGGACAAAAGGGGAAAGTCGGCCAAATTGGTGTGACAGCTGAACTCAACCATAGCG
TGGGGGCTAAGTTGAAATATGGCTTCACCCAATCATGGGCGAATGCGACCCAGATTTTTAAAATTCTCGGGTCATTCTTA
ACGGGTGGTTTTTCACTCAATAAACTAGCCGGACCAGTCGGCATGTATTCAATGACGACGCAATTCGCGAGTCAAGGCTT
TACAATGCTCGTCTACTTCTTAGCGTTCTTATCCGTCAACTTGGGGATTATGAACCTGATTCCAATTCCGGTCCTCGATG
GTGGTAAGCTCGTGATCAACGTGATTGAAGCGATTCGCGGTAAACCCATCTCACCGGAAAAAGAAGGCATTGTCACCCTT
GTCGGGGTCGGCATGATGGTCGTCTTAATGGTCTTGGTCACATGGAACGATATTCAACGCTTTTTCTTTTAG

Domains

Predicted by InterproScan.

PDZ domain (PDZ_6)

(205-258)

Peptidase family M50 (Peptidase_M50)

(6-409)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMD-9

47.674

100

0.485
  eeP Streptococcus thermophilus LMG 18311

47.674

100

0.485

Multiple sequence alignment