Detailed information
Bioinformatically predicted
Overview
| Name | comGC | Type | Machinery gene |
| Locus tag | C0W45_RS03605 | Genome accession | NZ_CP029966 |
| Coordinates | 688781..689089 (+) | Length | 102 a.a. |
| NCBI ID | WP_004270901.1 | Uniprot ID | A0AAJ0LFY3 |
| Organism | Latilactobacillus curvatus strain ZJUNIT8 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 683781..694089
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C0W45_RS03565 (C0W45_03565) | - | 684063..684302 (-) | 240 | WP_004270892.1 | cytochrome b5 domain-containing protein | - |
| C0W45_RS03570 (C0W45_03570) | - | 684497..684832 (+) | 336 | WP_111447552.1 | hypothetical protein | - |
| C0W45_RS03580 (C0W45_03580) | - | 685013..685390 (-) | 378 | WP_111447553.1 | hypothetical protein | - |
| C0W45_RS03585 (C0W45_03585) | - | 685493..685993 (+) | 501 | WP_111447554.1 | VanZ family protein | - |
| C0W45_RS03590 (C0W45_03590) | - | 686083..686814 (+) | 732 | WP_004270897.1 | YebC/PmpR family DNA-binding transcriptional regulator | - |
| C0W45_RS03595 (C0W45_03595) | comGA | 686918..687793 (+) | 876 | WP_111447555.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| C0W45_RS03600 (C0W45_03600) | comGB | 687783..688784 (+) | 1002 | WP_004270906.1 | type II secretion system F family protein | Machinery gene |
| C0W45_RS03605 (C0W45_03605) | comGC | 688781..689089 (+) | 309 | WP_004270901.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| C0W45_RS03610 (C0W45_03610) | - | 689121..689513 (+) | 393 | WP_004270899.1 | hypothetical protein | - |
| C0W45_RS10235 | - | 689578..689805 (+) | 228 | WP_162619227.1 | hypothetical protein | - |
| C0W45_RS10615 | - | 689771..689854 (+) | 84 | Protein_686 | type II secretion system protein | - |
| C0W45_RS03615 (C0W45_03615) | - | 689876..690256 (+) | 381 | WP_004270914.1 | ComGF family competence protein | - |
| C0W45_RS03620 (C0W45_03620) | - | 690234..690557 (+) | 324 | WP_039099486.1 | hypothetical protein | - |
| C0W45_RS03625 (C0W45_03625) | - | 690673..691692 (+) | 1020 | WP_307722871.1 | class I SAM-dependent methyltransferase | - |
| C0W45_RS03630 (C0W45_03630) | - | 691714..692907 (+) | 1194 | WP_004270911.1 | acetate/propionate family kinase | - |
| C0W45_RS03635 (C0W45_03635) | - | 692967..693419 (+) | 453 | WP_111447557.1 | laaL | - |
Sequence
Protein
Download Length: 102 a.a. Molecular weight: 11238.13 Da Isoelectric Point: 9.6264
>NTDB_id=297959 C0W45_RS03605 WP_004270901.1 688781..689089(+) (comGC) [Latilactobacillus curvatus strain ZJUNIT8]
MKKKRNAFTLIEMVVVLAVIAMLVLLIAPNLMHQKETAEQKTDTALVATIQTQVELAEDDGKTVSSLADLASGEKYLTNN
QVKQAEKRGITIKDNKVVQNTK
MKKKRNAFTLIEMVVVLAVIAMLVLLIAPNLMHQKETAEQKTDTALVATIQTQVELAEDDGKTVSSLADLASGEKYLTNN
QVKQAEKRGITIKDNKVVQNTK
Nucleotide
Download Length: 309 bp
>NTDB_id=297959 C0W45_RS03605 WP_004270901.1 688781..689089(+) (comGC) [Latilactobacillus curvatus strain ZJUNIT8]
ATGAAGAAGAAAAGAAATGCATTTACATTGATCGAAATGGTCGTTGTGCTAGCTGTGATAGCAATGTTAGTCTTGTTAAT
TGCACCTAATTTAATGCATCAGAAAGAGACAGCTGAGCAAAAAACGGATACGGCTCTAGTGGCAACGATTCAAACACAAG
TTGAATTAGCTGAGGATGACGGTAAAACGGTGTCGAGTCTAGCCGATTTAGCATCAGGTGAAAAATATTTAACCAATAAT
CAGGTTAAACAAGCTGAAAAACGCGGCATAACAATTAAGGATAATAAAGTTGTTCAAAATACAAAATAA
ATGAAGAAGAAAAGAAATGCATTTACATTGATCGAAATGGTCGTTGTGCTAGCTGTGATAGCAATGTTAGTCTTGTTAAT
TGCACCTAATTTAATGCATCAGAAAGAGACAGCTGAGCAAAAAACGGATACGGCTCTAGTGGCAACGATTCAAACACAAG
TTGAATTAGCTGAGGATGACGGTAAAACGGTGTCGAGTCTAGCCGATTTAGCATCAGGTGAAAAATATTTAACCAATAAT
CAGGTTAAACAAGCTGAAAAACGCGGCATAACAATTAAGGATAATAAAGTTGTTCAAAATACAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGC | Latilactobacillus sakei subsp. sakei 23K |
60 |
98.039 |
0.588 |