Detailed information NTG0297858

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: EQH17_RS10795
• Genome accession: NZ_CP035263
• Coordinates: 2129316..2130413 (+)
• Length: 365 a.a.
• NCBI ID: WP_000266651.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain TVO_1901922
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2124316..2135413

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EQH17_RS10770 (EQH17_11365)	pgsA	2124837..2125382 (-)	546	WP_000712129.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-
EQH17_RS10775 (EQH17_11370)	rodZ	2125393..2126214 (-)	822	WP_001227958.1	cytoskeleton protein RodZ	-
EQH17_RS10780 (EQH17_11375)	yfmH	2126256..2127539 (-)	1284	WP_238094405.1	EF-P 5-aminopentanol modification-associated protein YfmH	-
EQH17_RS10785 (EQH17_11380)	yfmF	2127536..2128786 (-)	1251	WP_000424272.1	EF-P 5-aminopentanol modification-associated protein YfmF	-
EQH17_RS10790 (EQH17_11385)	yaaA	2128945..2129313 (+)	369	WP_000455903.1	S4 domain-containing protein YaaA	-
EQH17_RS10795 (EQH17_11390)	recF	2129316..2130413 (+)	1098	WP_000266651.1	DNA replication/repair protein RecF	Machinery gene
EQH17_RS10800 (EQH17_11395)	guaB	2130464..2131942 (-)	1479	WP_000073428.1	IMP dehydrogenase	-
EQH17_RS10805 (EQH17_11400)	trpS	2132094..2133119 (-)	1026	WP_000165444.1	tryptophan--tRNA ligase	-
EQH17_RS10810 (EQH17_11405)	-	2133325..2134947 (+)	1623	WP_000958770.1	ATP-binding cassette domain-containing protein	-

Sequence

Protein

• Length: 365 a.a.
• Molecular weight: 41871.94 Da
• Isoelectric Point: 8.6747

>NTDB_id=297858 EQH17_RS10795 WP_000266651.1 2129316..2130413(+) (recF) [Streptococcus pneumoniae strain TVO_1901922]
MWLQHLSLKTFRNYKETKIDFNPKLNVFLGRNAQGKTNMLEAIYFLALTRSHRTQTDKNLIHFDEEQLHLSGLVQKKTGS
IPLEIELTQKGRVTKVNHLKQARLSDYVGHMNVVLFAPEDLQLIKGAPSIRRKFIDMELGQIKPIYLSDLTNYNHILKQR
NTYLKSAQKIDETFLSVLDDQLVDYGCRVMNHRLDFIKKLESFGRKKHFELSNQIEELSISYQSSVNITDKQNLSESFKI
ALEKSRSRDLFKKNTGVGPHRDDISFYINGMDASFGSQGQHRSLVLSIKLAEIELMESITTESPILLLDDVMSELDNTRQ
LKLLETISQSIQTFITTTSLDHLQNLPENLSIFTIQDGKAAVNGN

Nucleotide

• Length: 1098 bp

>NTDB_id=297858 EQH17_RS10795 WP_000266651.1 2129316..2130413(+) (recF) [Streptococcus pneumoniae strain TVO_1901922]
ATGTGGCTACAACATCTATCTCTCAAGACTTTTCGTAATTACAAAGAAACGAAAATAGACTTTAATCCTAAATTGAATGT
CTTTTTGGGACGTAATGCACAAGGAAAAACAAACATGTTAGAGGCTATCTATTTTTTAGCCTTAACGCGTAGTCATCGAA
CTCAAACAGATAAAAATCTCATTCATTTTGATGAGGAACAACTTCATCTTTCAGGTCTCGTTCAGAAAAAAACTGGATCC
ATTCCCCTAGAAATCGAACTAACACAAAAAGGCCGTGTAACAAAAGTTAATCACTTAAAACAGGCACGCCTTTCAGATTA
TGTAGGACACATGAATGTTGTCTTATTTGCTCCTGAAGATTTACAACTAATTAAAGGAGCACCTTCGATTCGACGAAAAT
TCATTGATATGGAACTTGGGCAAATTAAGCCAATCTATTTATCTGACTTAACCAATTATAACCACATCCTAAAGCAAAGA
AACACTTACCTAAAATCAGCTCAAAAAATAGATGAAACATTCCTTTCTGTGTTAGATGATCAGCTAGTTGATTATGGATG
TCGTGTAATGAATCACCGCTTAGATTTCATAAAAAAACTAGAATCATTTGGGCGTAAGAAACATTTTGAACTCTCTAATC
AGATCGAAGAGTTGTCAATATCCTATCAATCTTCTGTCAATATAACTGACAAACAAAACTTATCCGAATCTTTCAAAATT
GCTTTAGAAAAAAGTAGATCCAGAGATTTATTTAAAAAGAATACTGGTGTCGGTCCTCATCGAGATGACATTTCTTTTTA
TATAAATGGGATGGATGCTAGTTTCGGAAGCCAAGGTCAACATCGTAGTCTCGTCCTCTCGATAAAATTAGCAGAAATCG
AATTAATGGAAAGCATTACCACAGAATCTCCGATATTACTGCTTGACGATGTGATGAGTGAACTTGACAACACTAGACAG
TTAAAATTATTAGAAACGATTTCTCAATCAATCCAAACCTTTATCACAACAACAAGCTTAGACCATCTTCAAAATCTGCC
AGAAAATCTAAGTATCTTCACTATTCAGGATGGTAAGGCTGCTGTAAATGGAAATTGA

Domains

Predicted by InterProScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (3-358)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Streptococcus pneumoniae R6	99.452	100	0.995
recF	Bacillus subtilis subsp. subtilis str. 168	45.902	100	0.46