Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   EQH17_RS07340 Genome accession   NZ_CP035263
Coordinates   1490836..1491513 (-) Length   225 a.a.
NCBI ID   WP_050096421.1    Uniprot ID   -
Organism   Streptococcus pneumoniae strain TVO_1901922     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1485836..1496513
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EQH17_RS07320 (EQH17_07755) - 1485997..1486626 (-) 630 WP_000762083.1 NAD(P)-dependent oxidoreductase -
  EQH17_RS11100 - 1486865..1487239 (+) 375 Protein_1470 hypothetical protein -
  EQH17_RS07325 (EQH17_07775) - 1487496..1487819 (+) 324 WP_000422779.1 MazG-like protein -
  EQH17_RS07330 (EQH17_07780) thrS 1487877..1489820 (+) 1944 WP_000608356.1 threonine--tRNA ligase -
  EQH17_RS07335 (EQH17_07785) - 1489869..1490843 (-) 975 WP_000887954.1 HAMP domain-containing histidine kinase -
  EQH17_RS07340 (EQH17_07790) braR 1490836..1491513 (-) 678 WP_050096421.1 response regulator transcription factor Regulator
  EQH17_RS07345 (EQH17_07795) - 1491669..1492742 (+) 1074 WP_001273828.1 DUF2974 domain-containing protein -
  EQH17_RS07350 (EQH17_07800) - 1492833..1493136 (-) 304 Protein_1476 hypothetical protein -
  EQH17_RS07355 (EQH17_07805) - 1493205..1493642 (-) 438 WP_001166786.1 Rrf2 family transcriptional regulator -
  EQH17_RS07360 (EQH17_07810) - 1493718..1494560 (-) 843 WP_000160943.1 metallophosphoesterase -
  EQH17_RS07365 (EQH17_07815) - 1494672..1495322 (+) 651 WP_000188505.1 metal-dependent transcriptional regulator -

Sequence

Protein


Download         Length: 225 a.a.        Molecular weight: 25936.10 Da        Isoelectric Point: 5.1362

>NTDB_id=297809 EQH17_RS07340 WP_050096421.1 1490836..1491513(-) (braR) [Streptococcus pneumoniae strain TVO_1901922]
MHKILLIEDDQVIRQQIGKMLSEWGFEVVLVEDFMEVLSLFVQSEPHLVLMDIGLPLFNGYHWCQEIRKISKAPIMFLSS
RDQAMDIVMAINMGADDFVTKPFDQQVLLAKVQGLLRRSYEFGRDESLLEYAGVILNTKSMDLHYQGQVLNLTKNEFQIL
RVLFEHAGNIVARDDLMRELWNSDFFIDDNTLSVNVARLRKKLEEQGLVGFIETKKGIGYGLKHA

Nucleotide


Download         Length: 678 bp        

>NTDB_id=297809 EQH17_RS07340 WP_050096421.1 1490836..1491513(-) (braR) [Streptococcus pneumoniae strain TVO_1901922]
ATGCACAAGATTTTATTAATAGAAGATGATCAGGTCATTCGTCAACAGATTGGGAAAATGCTCTCTGAATGGGGATTTGA
AGTGGTCCTGGTAGAAGACTTTATGGAAGTTTTGAGTCTATTTGTTCAGTCGGAACCTCATCTGGTCCTCATGGATATTG
GTTTGCCCTTGTTTAATGGTTATCACTGGTGTCAGGAAATCCGCAAGATTTCCAAGGCACCTATCATGTTTCTTTCTTCG
AGAGACCAGGCTATGGATATTGTCATGGCAATCAATATGGGGGCGGATGACTTTGTGACCAAGCCTTTTGACCAGCAGGT
TCTTTTAGCTAAGGTTCAGGGCTTGTTGCGTCGTTCCTATGAGTTTGGGCGTGATGAGAGTTTGCTGGAATATGCTGGTG
TTATCCTCAATACCAAATCCATGGATTTACATTATCAAGGGCAAGTCTTGAATTTGACCAAGAATGAATTCCAGATTTTA
CGCGTGTTATTTGAGCATGCAGGCAACATCGTAGCACGTGACGACCTGATGCGGGAACTTTGGAACAGTGACTTTTTCAT
TGATGATAATACCCTCTCTGTCAATGTGGCTCGTTTGCGTAAAAAGTTGGAGGAGCAGGGATTGGTAGGATTTATCGAGA
CCAAGAAAGGAATAGGGTACGGATTGAAGCATGCTTGA

Domains

Predicted by InterProScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(147-221)

Response regulator receiver domain (Response_reg)

(4-112)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

48.165

96.889

0.467
  vicR Streptococcus mutans UA159

34.894

100

0.364

Multiple sequence alignment