Detailed information NTG0297622

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: EQH19_RS10610
• Genome accession: NZ_CP035261
• Coordinates: 2068745..2069842 (+)
• Length: 365 a.a.
• NCBI ID: WP_000266666.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain TVO_1901924
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2063745..2074842

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EQH19_RS10585 (EQH19_11180)	pgsA	2064266..2064811 (-)	546	WP_000712132.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-
EQH19_RS10590 (EQH19_11185)	rodZ	2064822..2065643 (-)	822	WP_001227958.1	cytoskeleton protein RodZ	-
EQH19_RS10595 (EQH19_11190)	yfmH	2065685..2066968 (-)	1284	WP_000170183.1	EF-P 5-aminopentanol modification-associated protein YfmH	-
EQH19_RS10600 (EQH19_11195)	yfmF	2066965..2068215 (-)	1251	WP_000424253.1	EF-P 5-aminopentanol modification-associated protein YfmF	-
EQH19_RS10605 (EQH19_11200)	yaaA	2068374..2068742 (+)	369	WP_000455903.1	S4 domain-containing protein YaaA	-
EQH19_RS10610 (EQH19_11205)	recF	2068745..2069842 (+)	1098	WP_000266666.1	DNA replication/repair protein RecF	Machinery gene
EQH19_RS10615 (EQH19_11210)	guaB	2069893..2071371 (-)	1479	WP_000073428.1	IMP dehydrogenase	-
EQH19_RS10620 (EQH19_11215)	trpS	2071523..2072548 (-)	1026	WP_000165444.1	tryptophan--tRNA ligase	-
EQH19_RS10625 (EQH19_11220)	-	2072754..2074376 (+)	1623	WP_000958770.1	ATP-binding cassette domain-containing protein	-

Sequence

Protein

• Length: 365 a.a.
• Molecular weight: 41915.99 Da
• Isoelectric Point: 8.6711

>NTDB_id=297622 EQH19_RS10610 WP_000266666.1 2068745..2069842(+) (recF) [Streptococcus pneumoniae strain TVO_1901924]
MWLQHLSLKTFRNYKETKIDFNPKLNVFLGRNAQGKTNMLEAIYFLALTRSHRTRTDKNLIHFDEEQLHLSGLVQKKTGS
IPLEIELTQKGRVTKVNHLKQARLSDYVGHMNVVLFAPEDLQLIKGAPSIRRKFIDMELGQIKPIYLSDLTNYNHILKQR
NTYLKSDQKIDETFLSVLDDQLVDYGCRVMNHRLDFIKKLESFGRKKHFELSNQIEELSISYQSSVNITDKQNLSESFKI
ALEKSKSRDLFKKNTGVGPHRDDISFYINGMDASFGSQGQHRSLVLSIKLAEIELMESITTESPILLLDDVMSELDNTRQ
LKLLETISQSIQTFITTTSLDHLQNLPENLSIFTIQDGKAAVNGN

Nucleotide

• Length: 1098 bp

>NTDB_id=297622 EQH19_RS10610 WP_000266666.1 2068745..2069842(+) (recF) [Streptococcus pneumoniae strain TVO_1901924]
ATGTGGCTACAACATCTATCTCTCAAGACTTTTCGTAATTACAAAGAAACGAAAATAGACTTTAATCCTAAATTGAATGT
CTTTTTGGGACGTAATGCACAAGGAAAAACAAACATGTTAGAGGCTATCTATTTTTTAGCCTTAACGCGTAGTCATCGAA
CTCGAACAGATAAAAATCTCATTCATTTTGATGAGGAACAACTTCATCTTTCAGGTCTCGTTCAGAAAAAAACTGGATCC
ATTCCCCTAGAAATCGAACTAACACAAAAAGGCCGTGTAACAAAAGTTAATCACTTAAAACAGGCACGCCTTTCAGATTA
TGTAGGACACATGAATGTTGTCTTATTTGCTCCTGAAGATTTACAACTAATTAAAGGAGCACCTTCGATTCGACGAAAAT
TCATTGATATGGAACTTGGGCAAATTAAGCCAATCTACTTATCTGACTTAACCAATTATAACCACATCCTAAAGCAAAGA
AACACTTACCTAAAATCAGATCAAAAAATAGATGAAACATTCCTTTCTGTGTTAGATGATCAGCTAGTTGATTATGGATG
TCGTGTAATGAATCACCGCTTAGATTTCATAAAAAAACTAGAATCATTTGGGCGTAAGAAACATTTTGAACTCTCTAATC
AGATCGAAGAGTTGTCAATATCCTATCAATCTTCTGTCAATATAACTGACAAACAAAACTTATCCGAATCTTTCAAAATT
GCTTTAGAAAAAAGTAAATCCAGAGATTTATTTAAAAAGAATACTGGTGTCGGTCCTCATCGAGATGACATTTCTTTTTA
TATAAATGGGATGGATGCTAGTTTCGGAAGCCAAGGTCAACATCGTAGTCTCGTCCTCTCGATAAAATTAGCAGAAATCG
AATTAATGGAAAGCATTACCACAGAATCTCCGATATTACTGCTTGACGATGTGATGAGTGAACTTGACAACACTAGACAG
TTAAAATTATTAGAAACGATTTCTCAATCAATCCAAACCTTTATCACAACAACAAGCTTAGACCATCTTCAAAATCTGCC
AGAAAATCTAAGTATCTTCACTATTCAGGATGGTAAAGCTGCTGTAAATGGAAATTGA

Domains

Predicted by InterProScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (3-358)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Streptococcus pneumoniae R6	99.178	100	0.992
recF	Bacillus subtilis subsp. subtilis str. 168	45.628	100	0.458