Detailed information NTG0297036

Bioinformatically predicted

Overview

• Name: comR
• Type: Regulator
• Locus tag: EQH23_RS00380
• Genome accession: NZ_CP035257
• Coordinates: 66662..67555 (+)
• Length: 297 a.a.
• NCBI ID: WP_000343888.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain TVO_1901928
• Function: activate transcription of comX (predicted from homology) Competence regulation

Genomic Context

Location: 61662..72555

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EQH23_RS00345 (EQH23_00345)	-	61975..63144 (+)	1170	WP_000366345.1	pyridoxal phosphate-dependent aminotransferase	-
EQH23_RS00350 (EQH23_00350)	recO	63141..63911 (+)	771	WP_000616167.1	DNA repair protein RecO	Machinery gene
EQH23_RS00355 (EQH23_00355)	plsX	63908..64900 (+)	993	WP_000717453.1	phosphate acyltransferase PlsX	-
EQH23_RS00360 (EQH23_00360)	-	64906..65139 (+)	234	WP_000136447.1	acyl carrier protein	-
EQH23_RS00365 (EQH23_00365)	-	65176..65475 (+)	300	Protein_66	transposase family protein	-
EQH23_RS00370 (EQH23_00370)	blpU	65678..65908 (+)	231	WP_001093487.1	bacteriocin-like peptide BlpU	-
EQH23_RS11030	-	65911..66036 (+)	126	WP_000346297.1	PncF family bacteriocin immunity protein	-
EQH23_RS00375 (EQH23_00375)	-	66447..66641 (+)	195	WP_000756776.1	hypothetical protein	-
EQH23_RS00380 (EQH23_00380)	comR	66662..67555 (+)	894	WP_000343888.1	XRE family transcriptional regulator	Regulator
EQH23_RS00385 (EQH23_00385)	-	68098..68394 (+)	297	WP_000837726.1	uberolysin/carnocyclin family circular bacteriocin	-
EQH23_RS00390 (EQH23_00390)	-	68401..69537 (+)	1137	WP_000698828.1	hypothetical protein	-
EQH23_RS00395 (EQH23_00395)	-	69534..70016 (+)	483	WP_001232094.1	stage II sporulation protein M	-
EQH23_RS00400 (EQH23_00400)	-	70013..70609 (+)	597	WP_000687787.1	ATP-binding cassette domain-containing protein	-
EQH23_RS00405 (EQH23_00405)	-	70590..71081 (+)	492	WP_000671990.1	hypothetical protein	-

Sequence

Protein

• Length: 297 a.a.
• Molecular weight: 34517.01 Da
• Isoelectric Point: 4.6498

>NTDB_id=297036 EQH23_RS00380 WP_000343888.1 66662..67555(+) (comR) [Streptococcus pneumoniae strain TVO_1901928]
MDELKREIGYKIKTIRRSCGKTQIDICGDESELTIRQLARIENGQALATLPKLLLIADKLGVSLQNIVDVKVIEIPKGFL
KLKDELIHSQTYADKGRIERKEAILEEIYENYYENLPEEEQLIVDVTQARFDIYGSSDVTYGLGLVEEYFQQLLKKKYFS
VNDLLIIELYFFCCAMGLEDKEHFEELAQKVLLCSEYEDKASLVQMEKVLLSLFIQIQTEDSLIYIQTFEKIIAKTRHVF
YRPHLFLLKAKYALFVDKNILEAESFYEKAISLAELLDDQVLVQRILAEKQIDFPTT

Nucleotide

• Length: 894 bp

>NTDB_id=297036 EQH23_RS00380 WP_000343888.1 66662..67555(+) (comR) [Streptococcus pneumoniae strain TVO_1901928]
ATGGATGAGTTGAAACGTGAAATTGGTTATAAAATCAAAACTATTAGGCGATCTTGTGGAAAAACTCAGATAGATATTTG
TGGTGATGAATCAGAGTTGACGATTCGTCAGCTAGCACGTATTGAAAATGGGCAAGCTTTAGCAACACTTCCTAAATTAT
TATTGATTGCGGATAAACTTGGAGTATCATTACAGAATATTGTGGATGTTAAGGTTATAGAGATTCCAAAAGGATTCCTA
AAACTCAAAGATGAGCTGATTCATTCTCAAACCTACGCTGATAAGGGAAGAATCGAACGAAAAGAAGCTATACTTGAGGA
AATATATGAAAACTATTATGAGAATTTGCCTGAGGAAGAGCAGTTAATTGTGGATGTGACACAAGCTCGTTTTGATATTT
ATGGTAGTTCAGATGTGACCTACGGTTTAGGGTTAGTGGAAGAATATTTCCAGCAGTTATTAAAAAAGAAATATTTTTCT
GTAAATGATTTGTTGATTATTGAATTGTATTTCTTTTGTTGTGCTATGGGATTAGAAGATAAAGAACATTTTGAGGAGTT
AGCTCAAAAAGTATTGCTATGTTCAGAATATGAAGATAAGGCTAGCCTAGTTCAAATGGAAAAAGTTCTTCTGAGCCTAT
TTATCCAAATTCAGACAGAAGATAGTCTGATATATATTCAAACATTTGAGAAAATTATTGCTAAAACAAGACATGTTTTT
TACCGACCTCATCTATTTTTGCTAAAGGCAAAATATGCTTTATTTGTAGACAAGAATATTTTAGAGGCAGAAAGTTTCTA
TGAAAAGGCGATTTCTCTAGCAGAATTGCTAGACGATCAGGTATTAGTTCAGAGAATTTTAGCAGAAAAACAGATAGATT
TCCCAACAACCTGA

Domains

Predicted by InterProScan.

• ComR tetratricopeptide (ComR_TPR) (76-289)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comR	Streptococcus mutans UA159	36.667	100	0.37