Detailed information NTG0296652

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: EQH29_RS10475
• Genome accession: NZ_CP035251
• Coordinates: 2082260..2083357 (+)
• Length: 365 a.a.
• NCBI ID: WP_000266660.1
• Uniprot ID: Q97N44
• Organism: Streptococcus pneumoniae strain TVO_1901935
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2077260..2088357

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EQH29_RS10450 (EQH29_11085)	pgsA	2077781..2078326 (-)	546	WP_000712132.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-
EQH29_RS10455 (EQH29_11090)	rodZ	2078337..2079158 (-)	822	WP_001227957.1	cytoskeleton protein RodZ	-
EQH29_RS10460 (EQH29_11095)	yfmH	2079200..2080483 (-)	1284	WP_000170215.1	EF-P 5-aminopentanol modification-associated protein YfmH	-
EQH29_RS10465 (EQH29_11100)	yfmF	2080480..2081730 (-)	1251	WP_000424271.1	EF-P 5-aminopentanol modification-associated protein YfmF	-
EQH29_RS10470 (EQH29_11105)	yaaA	2081889..2082257 (+)	369	WP_000455903.1	S4 domain-containing protein YaaA	-
EQH29_RS10475 (EQH29_11110)	recF	2082260..2083357 (+)	1098	WP_000266660.1	DNA replication/repair protein RecF	Machinery gene
EQH29_RS10480 (EQH29_11115)	guaB	2083408..2084886 (-)	1479	WP_000073428.1	IMP dehydrogenase	-
EQH29_RS10485 (EQH29_11120)	trpS	2085038..2086063 (-)	1026	WP_000165444.1	tryptophan--tRNA ligase	-
EQH29_RS10490 (EQH29_11125)	-	2086269..2087891 (+)	1623	WP_000958770.1	ATP-binding cassette domain-containing protein	-

Sequence

Protein

• Length: 365 a.a.
• Molecular weight: 41900.00 Da
• Isoelectric Point: 9.0596

>NTDB_id=296652 EQH29_RS10475 WP_000266660.1 2082260..2083357(+) (recF) [Streptococcus pneumoniae strain TVO_1901935]
MWLQHLSLKTFRNYKETKIDFNPKLNVFLGRNAQGKTNMLEAIYFLALTRSHRTRTDKNLIHFDEEQLHLSGLVQKKTGS
IPLEIELTQKGRVTKVNHLKQARLSDYVGHMNVVLFAPEDLQLIKGAPSIRRKFIDMELGQIKPIYLSDLTNYNHILKQR
NTYLKSAQKIDETFLSVLDDQLVDYGCRVMNHRLDFIKKLESFGRKKHFELSNQIEELSISYQSSVNITDKQNLSESFKI
ALEKSRSRDLFKKNTGVGPHRDDISFYINGMDASFGSQGQHRSLVLSIKLAEIELMESITTESPILLLDDVMSELDNTRQ
LKLLETISQSIQTFITTTSLDHLQNLPENLSIFTIQDGKAAVNGN

Nucleotide

• Length: 1098 bp

>NTDB_id=296652 EQH29_RS10475 WP_000266660.1 2082260..2083357(+) (recF) [Streptococcus pneumoniae strain TVO_1901935]
ATGTGGCTACAACATCTATCTCTCAAGACTTTTCGTAATTACAAAGAAACGAAAATAGACTTTAATCCTAAATTGAATGT
CTTTTTGGGACGTAATGCACAAGGAAAAACAAACATGTTAGAGGCTATCTATTTTTTAGCCTTAACGCGTAGTCATCGAA
CTCGAACAGATAAAAATCTCATTCATTTTGATGAGGAACAACTTCATCTTTCAGGTCTCGTTCAGAAAAAAACTGGATCC
ATTCCCCTAGAAATCGAACTAACACAAAAAGGTCGTGTAACAAAAGTTAATCACTTAAAACAGGCACGCCTTTCAGATTA
TGTAGGACACATGAATGTTGTCTTATTTGCTCCTGAAGATTTACAACTAATTAAAGGAGCACCTTCGATTCGACGAAAAT
TCATTGATATGGAACTTGGGCAAATTAAGCCAATCTATTTATCTGACTTAACCAATTATAACCACATCCTAAAGCAAAGA
AACACTTACCTAAAATCAGCTCAAAAAATAGATGAAACATTCCTTTCTGTGTTAGATGATCAGCTAGTTGATTATGGATG
TCGTGTAATGAATCACCGCTTAGATTTCATAAAAAAACTAGAATCATTTGGGCGTAAGAAACATTTTGAACTCTCTAATC
AGATCGAAGAGTTGTCAATATCCTATCAATCTTCTGTCAATATAACTGACAAACAAAACTTATCCGAATCTTTCAAAATT
GCTTTAGAAAAAAGTAGATCCAGAGATTTATTTAAAAAGAATACTGGTGTCGGTCCTCATCGAGATGACATTTCTTTTTA
TATAAATGGGATGGATGCTAGTTTCGGAAGCCAAGGTCAACATCGTAGTCTCGTCCTCTCGATAAAATTAGCAGAAATCG
AATTAATGGAAAGCATTACCACAGAATCTCCTATATTACTGCTTGACGATGTGATGAGTGAACTTGACAACACTAGACAG
TTAAAATTATTAGAAACGATTTCTCAATCAATCCAAACCTTTATCACAACAACAAGCTTAGACCATCTTCAAAATCTGCC
AGAAAATCTAAGTATCTTCACTATTCAGGATGGTAAAGCTGCTGTAAATGGAAATTGA

Domains

Predicted by InterProScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (3-358)

3D structure

• AlphaFold DB: Q97N44

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Streptococcus pneumoniae R6	99.726	100	0.997
recF	Bacillus subtilis subsp. subtilis str. 168	45.902	100	0.46