Detailed information NTG0296530

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: EQH31_RS10920
• Genome accession: NZ_CP035249
• Coordinates: 2123885..2124982 (+)
• Length: 365 a.a.
• NCBI ID: WP_000266660.1
• Uniprot ID: Q97N44
• Organism: Streptococcus pneumoniae strain TVO_1901938
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2118885..2129982

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EQH31_RS10895 (EQH31_11580)	pgsA	2119406..2119951 (-)	546	WP_000712132.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-
EQH31_RS10900 (EQH31_11585)	rodZ	2119962..2120783 (-)	822	WP_001227958.1	cytoskeleton protein RodZ	-
EQH31_RS10905 (EQH31_11590)	yfmH	2120825..2122108 (-)	1284	WP_000170222.1	EF-P 5-aminopentanol modification-associated protein YfmH	-
EQH31_RS10910 (EQH31_11595)	yfmF	2122105..2123355 (-)	1251	WP_000424278.1	EF-P 5-aminopentanol modification-associated protein YfmF	-
EQH31_RS10915 (EQH31_11600)	yaaA	2123514..2123882 (+)	369	WP_000455900.1	S4 domain-containing protein YaaA	-
EQH31_RS10920 (EQH31_11605)	recF	2123885..2124982 (+)	1098	WP_000266660.1	DNA replication/repair protein RecF	Machinery gene
EQH31_RS10925 (EQH31_11610)	guaB	2125033..2126511 (-)	1479	WP_000073428.1	IMP dehydrogenase	-
EQH31_RS10930 (EQH31_11615)	trpS	2126664..2127689 (-)	1026	WP_000165444.1	tryptophan--tRNA ligase	-
EQH31_RS10935 (EQH31_11620)	-	2127895..2129517 (+)	1623	WP_000958770.1	ATP-binding cassette domain-containing protein	-

Sequence

Protein

• Length: 365 a.a.
• Molecular weight: 41900.00 Da
• Isoelectric Point: 9.0596

>NTDB_id=296530 EQH31_RS10920 WP_000266660.1 2123885..2124982(+) (recF) [Streptococcus pneumoniae strain TVO_1901938]
MWLQHLSLKTFRNYKETKIDFNPKLNVFLGRNAQGKTNMLEAIYFLALTRSHRTRTDKNLIHFDEEQLHLSGLVQKKTGS
IPLEIELTQKGRVTKVNHLKQARLSDYVGHMNVVLFAPEDLQLIKGAPSIRRKFIDMELGQIKPIYLSDLTNYNHILKQR
NTYLKSAQKIDETFLSVLDDQLVDYGCRVMNHRLDFIKKLESFGRKKHFELSNQIEELSISYQSSVNITDKQNLSESFKI
ALEKSRSRDLFKKNTGVGPHRDDISFYINGMDASFGSQGQHRSLVLSIKLAEIELMESITTESPILLLDDVMSELDNTRQ
LKLLETISQSIQTFITTTSLDHLQNLPENLSIFTIQDGKAAVNGN

Nucleotide

• Length: 1098 bp

>NTDB_id=296530 EQH31_RS10920 WP_000266660.1 2123885..2124982(+) (recF) [Streptococcus pneumoniae strain TVO_1901938]
ATGTGGCTACAACATCTATCTCTCAAGACTTTTCGTAATTACAAAGAAACGAAAATAGACTTTAATCCTAAATTGAATGT
CTTTTTGGGACGTAATGCACAAGGAAAAACAAACATGTTAGAGGCTATCTATTTTTTAGCCTTAACGCGTAGTCATCGAA
CTCGAACAGATAAAAATCTCATTCATTTTGATGAGGAACAACTTCATCTTTCAGGTCTCGTTCAGAAAAAAACTGGATCC
ATTCCCCTAGAAATCGAACTAACACAAAAAGGCCGTGTAACAAAAGTTAATCACTTAAAACAGGCACGCCTTTCAGATTA
TGTAGGACACATGAATGTTGTCTTATTTGCTCCTGAAGATTTACAACTAATTAAAGGAGCACCTTCGATTCGACGAAAAT
TCATTGATATGGAACTTGGGCAAATTAAGCCAATCTATTTATCTGACTTAACCAATTATAACCACATCCTAAAGCAAAGA
AACACTTACCTAAAATCAGCTCAAAAAATAGATGAAACATTCCTTTCTGTGTTAGATGATCAGCTAGTTGATTATGGATG
TCGTGTAATGAATCACCGCTTAGATTTCATAAAAAAACTAGAATCATTTGGGCGTAAGAAACATTTTGAACTCTCTAATC
AGATCGAAGAGTTGTCAATATCCTATCAATCTTCTGTCAATATAACTGACAAACAAAACTTATCCGAATCTTTCAAAATT
GCTTTAGAAAAAAGTAGATCCAGAGATTTATTTAAAAAGAATACTGGTGTCGGTCCTCATCGAGATGACATTTCTTTTTA
TATAAATGGGATGGATGCTAGTTTCGGAAGCCAAGGTCAACATCGTAGTCTCGTCCTCTCGATAAAATTAGCAGAAATCG
AATTAATGGAAAGCATTACCACAGAATCTCCTATATTACTGCTTGACGATGTGATGAGTGAACTTGACAACACTAGACAG
TTAAAATTATTAGAAACGATTTCTCAATCAATCCAAACCTTTATCACAACAACAAGCTTAGACCATCTTCAAAATCTGCC
AGAAAATCTAAGTATCTTCACTATTCAGGATGGTAAAGCTGCTGTAAATGGAAATTGA

Domains

Predicted by InterProScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (3-358)

3D structure

• AlphaFold DB: Q97N44

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Streptococcus pneumoniae R6	99.726	100	0.997
recF	Bacillus subtilis subsp. subtilis str. 168	45.902	100	0.46