Detailed information NTG0296411

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: EQH32_RS10610
• Genome accession: NZ_CP035248
• Coordinates: 2057925..2059022 (+)
• Length: 365 a.a.
• NCBI ID: WP_000266660.1
• Uniprot ID: Q97N44
• Organism: Streptococcus pneumoniae strain TVO_1901939
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2052925..2064022

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EQH32_RS10585 (EQH32_11160)	pgsA	2053445..2053990 (-)	546	WP_000712132.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-
EQH32_RS10590 (EQH32_11165)	rodZ	2054001..2054822 (-)	822	WP_001227958.1	cytoskeleton protein RodZ	-
EQH32_RS10595 (EQH32_11170)	yfmH	2054864..2056148 (-)	1285	Protein_2070	EF-P 5-aminopentanol modification-associated protein YfmH	-
EQH32_RS10600 (EQH32_11175)	yfmF	2056145..2057395 (-)	1251	WP_000424278.1	EF-P 5-aminopentanol modification-associated protein YfmF	-
EQH32_RS10605 (EQH32_11180)	yaaA	2057554..2057922 (+)	369	WP_000455900.1	S4 domain-containing protein YaaA	-
EQH32_RS10610 (EQH32_11185)	recF	2057925..2059022 (+)	1098	WP_000266660.1	DNA replication/repair protein RecF	Machinery gene
EQH32_RS10615 (EQH32_11190)	guaB	2059073..2060551 (-)	1479	WP_000073428.1	IMP dehydrogenase	-
EQH32_RS10620 (EQH32_11195)	trpS	2060704..2061729 (-)	1026	WP_000165444.1	tryptophan--tRNA ligase	-
EQH32_RS10625 (EQH32_11200)	-	2061935..2063557 (+)	1623	WP_000958770.1	ATP-binding cassette domain-containing protein	-

Sequence

Protein

• Length: 365 a.a.
• Molecular weight: 41900.00 Da
• Isoelectric Point: 9.0596

>NTDB_id=296411 EQH32_RS10610 WP_000266660.1 2057925..2059022(+) (recF) [Streptococcus pneumoniae strain TVO_1901939]
MWLQHLSLKTFRNYKETKIDFNPKLNVFLGRNAQGKTNMLEAIYFLALTRSHRTRTDKNLIHFDEEQLHLSGLVQKKTGS
IPLEIELTQKGRVTKVNHLKQARLSDYVGHMNVVLFAPEDLQLIKGAPSIRRKFIDMELGQIKPIYLSDLTNYNHILKQR
NTYLKSAQKIDETFLSVLDDQLVDYGCRVMNHRLDFIKKLESFGRKKHFELSNQIEELSISYQSSVNITDKQNLSESFKI
ALEKSRSRDLFKKNTGVGPHRDDISFYINGMDASFGSQGQHRSLVLSIKLAEIELMESITTESPILLLDDVMSELDNTRQ
LKLLETISQSIQTFITTTSLDHLQNLPENLSIFTIQDGKAAVNGN

Nucleotide

• Length: 1098 bp

>NTDB_id=296411 EQH32_RS10610 WP_000266660.1 2057925..2059022(+) (recF) [Streptococcus pneumoniae strain TVO_1901939]
ATGTGGCTACAACATCTATCTCTCAAGACTTTTCGTAATTACAAAGAAACGAAAATAGACTTTAATCCTAAATTGAATGT
CTTTTTGGGACGTAATGCACAAGGAAAAACAAACATGTTAGAGGCTATCTATTTTTTAGCCTTAACGCGTAGTCATCGAA
CTCGAACAGATAAAAATCTCATTCATTTTGATGAGGAACAACTTCATCTTTCAGGTCTCGTTCAGAAAAAAACTGGATCC
ATTCCCCTAGAAATCGAACTAACACAAAAAGGCCGTGTAACAAAAGTTAATCACTTAAAACAGGCACGCCTTTCAGATTA
TGTAGGACACATGAATGTTGTCTTATTTGCTCCTGAAGATTTACAACTAATTAAAGGAGCACCTTCGATTCGACGAAAAT
TCATTGATATGGAACTTGGGCAAATTAAGCCAATCTATTTATCTGACTTAACCAATTATAACCACATCCTAAAGCAAAGA
AACACTTACCTAAAATCAGCTCAAAAAATAGATGAAACATTCCTTTCTGTGTTAGATGATCAGCTAGTTGATTATGGATG
TCGTGTAATGAATCACCGCTTAGATTTCATAAAAAAACTAGAATCATTTGGGCGTAAGAAACATTTTGAACTCTCTAATC
AGATCGAAGAGTTGTCAATATCCTATCAATCTTCTGTCAATATAACTGACAAACAAAACTTATCCGAATCTTTCAAAATT
GCTTTAGAAAAAAGTAGATCCAGAGATTTATTTAAAAAGAATACTGGTGTCGGTCCTCATCGAGATGACATTTCTTTTTA
TATAAATGGGATGGATGCTAGTTTCGGAAGCCAAGGTCAACATCGTAGTCTCGTCCTCTCGATAAAATTAGCAGAAATCG
AATTAATGGAAAGCATTACCACAGAATCTCCTATATTACTGCTTGACGATGTGATGAGTGAACTTGACAACACTAGACAG
TTAAAATTATTAGAAACGATTTCTCAATCAATCCAAACCTTTATCACAACAACAAGCTTAGACCATCTTCAAAATCTGCC
AGAAAATCTAAGTATCTTCACTATTCAGGATGGTAAAGCTGCTGTAAATGGAAATTGA

Domains

Predicted by InterProScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (3-358)

3D structure

• AlphaFold DB: Q97N44

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Streptococcus pneumoniae R6	99.726	100	0.997
recF	Bacillus subtilis subsp. subtilis str. 168	45.902	100	0.46