Detailed information NTG0296292

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: EQH33_RS10290
• Genome accession: NZ_CP035247
• Coordinates: 2034461..2035558 (+)
• Length: 365 a.a.
• NCBI ID: WP_000266670.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain TVO_1901940
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2029461..2040558

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EQH33_RS10265 (EQH33_10850)	pgsA	2029982..2030527 (-)	546	WP_000712132.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-
EQH33_RS10270 (EQH33_10855)	rodZ	2030538..2031359 (-)	822	WP_001227958.1	cytoskeleton protein RodZ	-
EQH33_RS10275 (EQH33_10860)	yfmH	2031401..2032684 (-)	1284	WP_000170213.1	EF-P 5-aminopentanol modification-associated protein YfmH	-
EQH33_RS10280 (EQH33_10865)	yfmF	2032681..2033931 (-)	1251	WP_000424259.1	EF-P 5-aminopentanol modification-associated protein YfmF	-
EQH33_RS10285 (EQH33_10870)	yaaA	2034090..2034458 (+)	369	WP_000455903.1	S4 domain-containing protein YaaA	-
EQH33_RS10290 (EQH33_10875)	recF	2034461..2035558 (+)	1098	WP_000266670.1	DNA replication/repair protein RecF	Machinery gene
EQH33_RS10295 (EQH33_10880)	guaB	2035609..2037087 (-)	1479	WP_000073429.1	IMP dehydrogenase	-
EQH33_RS10300 (EQH33_10885)	trpS	2037239..2038264 (-)	1026	WP_000165444.1	tryptophan--tRNA ligase	-
EQH33_RS10305 (EQH33_10890)	-	2038470..2040092 (+)	1623	WP_000958770.1	ATP-binding cassette domain-containing protein	-

Sequence

Protein

• Length: 365 a.a.
• Molecular weight: 41927.06 Da
• Isoelectric Point: 9.3082

>NTDB_id=296292 EQH33_RS10290 WP_000266670.1 2034461..2035558(+) (recF) [Streptococcus pneumoniae strain TVO_1901940]
MWLQHLSLKTFRNYKETKIDFNPKLNVFLGRNAQGKTNMLEAIYFLALTRSHRTRTDKNLIHFDEEQLHLSGLVQKKTGS
IPLEIELTQKGRVTKVNHLKQARLSDYVGHMNVVLFAPEDLQLIKGAPSIRRKFIDMELGQIKPIYLSDLTNYNHILKQR
NTYLKSVQKIDETFLSVLDDQLVDYGCRVMNHRLDFIKKLESFGRKKHFELSNQIEELSISYQSSVNITDKQNLSESFKI
ALEKSRSRDLFKKNTGVGPHRDDISFYINGMDASFGSQGQHRSLVLSIKLAEIELMESITTESPILLLDDVMSELDNTRQ
LKLLETISQSIQTFITTTSLDHLQNLPENLSIFTIQNGKAAVNGN

Nucleotide

• Length: 1098 bp

>NTDB_id=296292 EQH33_RS10290 WP_000266670.1 2034461..2035558(+) (recF) [Streptococcus pneumoniae strain TVO_1901940]
ATGTGGCTACAACATCTATCTCTCAAGACTTTTCGTAATTACAAAGAAACGAAAATAGACTTTAATCCTAAATTGAATGT
CTTTTTGGGACGTAATGCACAAGGAAAAACAAACATGTTAGAGGCTATCTATTTTTTAGCCTTAACGCGTAGTCATCGAA
CTCGAACAGATAAAAATCTCATTCATTTTGATGAGGAACAACTTCATCTTTCAGGTCTCGTTCAGAAAAAAACTGGATCC
ATTCCCCTAGAAATCGAACTAACACAAAAAGGCCGTGTAACAAAAGTTAATCACTTAAAACAGGCACGCCTTTCAGATTA
TGTAGGACACATGAATGTTGTCTTATTTGCTCCTGAAGATTTACAACTAATTAAAGGAGCACCTTCGATTCGACGAAAAT
TCATTGATATGGAGCTTGGGCAAATTAAGCCAATCTATTTATCTGACTTAACCAATTATAACCACATCCTAAAGCAAAGA
AACACTTATCTAAAATCAGTTCAAAAAATAGATGAAACATTCCTTTCTGTGTTAGATGATCAGCTAGTTGATTATGGATG
TCGTGTAATGAATCACCGCTTAGATTTCATAAAAAAACTAGAATCATTTGGGCGTAAGAAACATTTTGAACTCTCTAATC
AGATCGAAGAGTTGTCAATATCCTATCAATCTTCTGTCAATATAACTGACAAACAAAACTTATCCGAATCTTTCAAAATT
GCTTTAGAAAAAAGTAGATCCAGAGATTTATTTAAAAAGAATACTGGTGTCGGTCCTCATCGAGATGACATTTCTTTTTA
TATAAATGGGATGGATGCTAGTTTCGGAAGCCAAGGTCAACATCGTAGTCTCGTCCTCTCGATAAAATTAGCAGAAATCG
AATTAATGGAAAGCATTACCACAGAATCTCCGATATTACTGCTTGACGATGTGATGAGTGAACTTGACAACACTAGACAG
TTAAAATTATTAGAAACGATTTCTCAATCAATCCAAACCTTTATCACAACAACAAGCTTAGACCATCTTCAAAATCTGCC
AGAAAATCTAAGTATCTTCACTATTCAGAATGGTAAAGCTGCTGTAAATGGAAATTGA

Domains

Predicted by InterProScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (3-358)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Streptococcus pneumoniae R6	99.178	100	0.992
recF	Bacillus subtilis subsp. subtilis str. 168	46.175	100	0.463