Detailed information NTG0296053

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: EQH35_RS10490
• Genome accession: NZ_CP035245
• Coordinates: 2022307..2023404 (+)
• Length: 365 a.a.
• NCBI ID: WP_000266660.1
• Uniprot ID: Q97N44
• Organism: Streptococcus pneumoniae strain TVO_1901943
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2017307..2028404

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EQH35_RS10465 (EQH35_11050)	pgsA	2017828..2018373 (-)	546	WP_000712141.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-
EQH35_RS10470 (EQH35_11055)	rodZ	2018384..2019205 (-)	822	WP_001227958.1	cytoskeleton protein RodZ	-
EQH35_RS10475 (EQH35_11060)	yfmH	2019247..2020530 (-)	1284	WP_000170216.1	EF-P 5-aminopentanol modification-associated protein YfmH	-
EQH35_RS10480 (EQH35_11065)	yfmF	2020527..2021777 (-)	1251	WP_000424281.1	EF-P 5-aminopentanol modification-associated protein YfmF	-
EQH35_RS10485 (EQH35_11070)	yaaA	2021936..2022304 (+)	369	WP_000455903.1	S4 domain-containing protein YaaA	-
EQH35_RS10490 (EQH35_11075)	recF	2022307..2023404 (+)	1098	WP_000266660.1	DNA replication/repair protein RecF	Machinery gene
EQH35_RS10495 (EQH35_11080)	guaB	2023455..2024933 (-)	1479	WP_000073423.1	IMP dehydrogenase	-
EQH35_RS10500 (EQH35_11085)	trpS	2025085..2026110 (-)	1026	WP_000165445.1	tryptophan--tRNA ligase	-
EQH35_RS10505 (EQH35_11090)	-	2026316..2027938 (+)	1623	WP_000958770.1	ATP-binding cassette domain-containing protein	-

Sequence

Protein

• Length: 365 a.a.
• Molecular weight: 41900.00 Da
• Isoelectric Point: 9.0596

>NTDB_id=296053 EQH35_RS10490 WP_000266660.1 2022307..2023404(+) (recF) [Streptococcus pneumoniae strain TVO_1901943]
MWLQHLSLKTFRNYKETKIDFNPKLNVFLGRNAQGKTNMLEAIYFLALTRSHRTRTDKNLIHFDEEQLHLSGLVQKKTGS
IPLEIELTQKGRVTKVNHLKQARLSDYVGHMNVVLFAPEDLQLIKGAPSIRRKFIDMELGQIKPIYLSDLTNYNHILKQR
NTYLKSAQKIDETFLSVLDDQLVDYGCRVMNHRLDFIKKLESFGRKKHFELSNQIEELSISYQSSVNITDKQNLSESFKI
ALEKSRSRDLFKKNTGVGPHRDDISFYINGMDASFGSQGQHRSLVLSIKLAEIELMESITTESPILLLDDVMSELDNTRQ
LKLLETISQSIQTFITTTSLDHLQNLPENLSIFTIQDGKAAVNGN

Nucleotide

• Length: 1098 bp

>NTDB_id=296053 EQH35_RS10490 WP_000266660.1 2022307..2023404(+) (recF) [Streptococcus pneumoniae strain TVO_1901943]
ATGTGGCTACAACATCTATCTCTCAAGACTTTTCGTAATTACAAAGAAACGAAAATAGACTTTAATCCTAAATTGAATGT
CTTTTTGGGACGTAATGCACAAGGAAAAACAAACATGTTAGAGGCTATCTATTTTTTAGCCTTAACGCGTAGTCATCGAA
CTCGAACAGATAAAAATCTCATTCATTTTGATGAGGAACAACTTCATCTTTCAGGTCTCGTTCAGAAAAAAACTGGATCC
ATTCCCCTAGAAATCGAACTAACACAAAAAGGCCGTGTAACAAAAGTTAATCACTTAAAACAGGCACGCCTTTCAGATTA
TGTAGGACACATGAATGTTGTCTTATTTGCTCCTGAAGATTTACAACTAATTAAAGGAGCACCTTCGATTCGACGAAAAT
TCATTGATATGGAACTTGGGCAAATTAAGCCAATCTATTTATCTGACTTAACCAATTATAACCACATCCTAAAGCAAAGA
AACACTTACCTAAAATCAGCTCAAAAAATAGATGAAACATTCCTTTCTGTGTTAGATGATCAGCTAGTTGATTATGGATG
TCGTGTAATGAATCACCGCTTAGATTTCATAAAAAAACTAGAATCATTTGGGCGTAAGAAACATTTTGAACTCTCTAATC
AGATCGAAGAGTTGTCAATATCCTATCAATCTTCTGTCAATATAACTGACAAACAAAACTTATCCGAATCTTTCAAAATT
GCTTTAGAAAAAAGTAGATCCAGAGATTTATTTAAAAAGAATACTGGTGTCGGTCCTCATCGAGATGACATTTCTTTTTA
TATAAATGGGATGGATGCTAGTTTCGGAAGCCAAGGTCAACATCGTAGTCTCGTCCTCTCGATAAAATTAGCAGAAATCG
AATTAATGGAAAGCATTACCACAGAATCTCCGATATTACTGCTTGACGATGTGATGAGTGAACTTGACAACACTAGACAG
TTAAAATTATTAGAAACGATTTCTCAATCAATCCAAACCTTTATCACAACAACAAGCTTAGACCATCTTCAAAATCTGCC
AGAAAATCTAAGTATCTTCACTATTCAGGATGGTAAAGCTGCTGTAAATGGAAATTGA

Domains

Predicted by InterProScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (3-358)

3D structure

• AlphaFold DB: Q97N44

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Streptococcus pneumoniae R6	99.726	100	0.997
recF	Bacillus subtilis subsp. subtilis str. 168	45.902	100	0.46