Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   DM292_RS20735 Genome accession   NZ_CP029772
Coordinates   4422085..4422492 (+) Length   135 a.a.
NCBI ID   WP_003282729.1    Uniprot ID   -
Organism   Stutzerimonas frequens strain R2A2     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 4417085..4427492
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DM292_RS20705 (DM292_20705) - 4417167..4418183 (-) 1017 WP_017245430.1 aspartate carbamoyltransferase catalytic subunit -
  DM292_RS20710 (DM292_20710) pyrR 4418242..4418757 (-) 516 WP_110778831.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  DM292_RS20715 (DM292_20715) ruvX 4418779..4419207 (-) 429 WP_017245428.1 Holliday junction resolvase RuvX -
  DM292_RS20720 (DM292_20720) - 4419204..4419773 (-) 570 WP_110778832.1 YqgE/AlgH family protein -
  DM292_RS20725 (DM292_20725) - 4419918..4420811 (-) 894 WP_110778833.1 energy transducer TonB -
  DM292_RS20730 (DM292_20730) gshB 4420899..4421849 (-) 951 WP_110778834.1 glutathione synthase -
  DM292_RS20735 (DM292_20735) pilG 4422085..4422492 (+) 408 WP_003282729.1 twitching motility response regulator PilG Regulator
  DM292_RS20740 (DM292_20740) pilH 4422536..4422901 (+) 366 WP_003297216.1 twitching motility response regulator PilH -
  DM292_RS20745 (DM292_20745) - 4422943..4423479 (+) 537 WP_110778835.1 chemotaxis protein CheW -
  DM292_RS20750 (DM292_20750) - 4423556..4425604 (+) 2049 WP_110778836.1 methyl-accepting chemotaxis protein -
  DM292_RS20755 (DM292_20755) - 4425666..4426532 (+) 867 WP_110778837.1 protein-glutamate O-methyltransferase CheR -

Sequence

Protein


Download         Length: 135 a.a.        Molecular weight: 14826.22 Da        Isoelectric Point: 7.2439

>NTDB_id=296002 DM292_RS20735 WP_003282729.1 4422085..4422492(+) (pilG) [Stutzerimonas frequens strain R2A2]
MEQHSEGLKVMVIDDSKTIRRTAETLLKKVGCDVITAVDGFDALAKIADTHPRIIFVDIMMPRLDGYQTCALIKNNSSFK
STPVIMLSSKDGLFDKAKGRIVGSDQYLTKPFSKEELLGAIKAHVPDFAPVEQAS

Nucleotide


Download         Length: 408 bp        

>NTDB_id=296002 DM292_RS20735 WP_003282729.1 4422085..4422492(+) (pilG) [Stutzerimonas frequens strain R2A2]
ATGGAACAGCACTCCGAGGGCTTGAAGGTCATGGTGATCGACGATTCGAAGACGATTCGTCGCACCGCTGAAACCCTGCT
GAAGAAAGTAGGTTGCGATGTCATCACCGCTGTTGACGGTTTCGATGCGCTCGCCAAGATTGCAGATACTCATCCTCGTA
TCATCTTCGTCGATATTATGATGCCCAGGCTGGACGGCTATCAGACCTGTGCGCTGATCAAGAACAACAGTTCCTTCAAG
TCGACGCCGGTGATCATGCTGTCTTCCAAAGATGGCCTCTTCGACAAGGCGAAAGGGCGTATCGTCGGGTCCGATCAATA
CCTCACCAAGCCGTTCAGCAAAGAAGAGCTGCTAGGCGCAATCAAGGCGCACGTCCCTGATTTCGCGCCGGTGGAACAAG
CATCCTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-121)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

76

92.593

0.704
  vicR Streptococcus mutans UA159

42.857

93.333

0.4

Multiple sequence alignment