Detailed information NTG0295935

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: EQH36_RS10690
• Genome accession: NZ_CP035244
• Coordinates: 2082468..2083565 (+)
• Length: 365 a.a.
• NCBI ID: WP_000266666.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain TVO_1901945
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2077468..2088565

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EQH36_RS10665 (EQH36_11190)	pgsA	2077989..2078534 (-)	546	WP_000712132.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-
EQH36_RS10670 (EQH36_11195)	rodZ	2078545..2079366 (-)	822	WP_001227958.1	cytoskeleton protein RodZ	-
EQH36_RS10675 (EQH36_11200)	yfmH	2079408..2080691 (-)	1284	WP_000170217.1	EF-P 5-aminopentanol modification-associated protein YfmH	-
EQH36_RS10680 (EQH36_11205)	yfmF	2080688..2081938 (-)	1251	WP_000424271.1	EF-P 5-aminopentanol modification-associated protein YfmF	-
EQH36_RS10685 (EQH36_11210)	yaaA	2082097..2082465 (+)	369	WP_000455903.1	S4 domain-containing protein YaaA	-
EQH36_RS10690 (EQH36_11215)	recF	2082468..2083565 (+)	1098	WP_000266666.1	DNA replication/repair protein RecF	Machinery gene
EQH36_RS10695 (EQH36_11220)	guaB	2083616..2085094 (-)	1479	WP_000073424.1	IMP dehydrogenase	-
EQH36_RS10700 (EQH36_11225)	trpS	2085246..2086271 (-)	1026	WP_000165444.1	tryptophan--tRNA ligase	-
EQH36_RS10705 (EQH36_11230)	-	2086477..2088099 (+)	1623	WP_000958770.1	ATP-binding cassette domain-containing protein	-

Sequence

Protein

• Length: 365 a.a.
• Molecular weight: 41915.99 Da
• Isoelectric Point: 8.6711

>NTDB_id=295935 EQH36_RS10690 WP_000266666.1 2082468..2083565(+) (recF) [Streptococcus pneumoniae strain TVO_1901945]
MWLQHLSLKTFRNYKETKIDFNPKLNVFLGRNAQGKTNMLEAIYFLALTRSHRTRTDKNLIHFDEEQLHLSGLVQKKTGS
IPLEIELTQKGRVTKVNHLKQARLSDYVGHMNVVLFAPEDLQLIKGAPSIRRKFIDMELGQIKPIYLSDLTNYNHILKQR
NTYLKSDQKIDETFLSVLDDQLVDYGCRVMNHRLDFIKKLESFGRKKHFELSNQIEELSISYQSSVNITDKQNLSESFKI
ALEKSKSRDLFKKNTGVGPHRDDISFYINGMDASFGSQGQHRSLVLSIKLAEIELMESITTESPILLLDDVMSELDNTRQ
LKLLETISQSIQTFITTTSLDHLQNLPENLSIFTIQDGKAAVNGN

Nucleotide

• Length: 1098 bp

>NTDB_id=295935 EQH36_RS10690 WP_000266666.1 2082468..2083565(+) (recF) [Streptococcus pneumoniae strain TVO_1901945]
ATGTGGCTACAACATCTATCTCTCAAGACTTTTCGTAATTACAAAGAAACGAAAATAGACTTTAATCCTAAATTGAATGT
CTTTTTGGGACGTAATGCACAAGGAAAAACAAACATGTTAGAGGCTATCTATTTTTTAGCCTTAACGCGTAGTCATCGAA
CTCGAACAGATAAAAATCTCATTCATTTTGATGAGGAACAACTTCATCTTTCAGGTCTCGTTCAGAAAAAAACTGGATCC
ATTCCCCTAGAAATCGAACTAACACAAAAAGGCCGTGTAACAAAAGTTAATCACTTAAAACAGGCACGCCTTTCAGATTA
TGTAGGACACATGAATGTTGTCTTATTTGCTCCTGAAGATTTACAACTAATTAAAGGAGCACCTTCGATTCGACGAAAAT
TCATCGATATGGAACTTGGGCAAATTAAGCCAATCTACTTATCTGACTTAACCAATTATAACCACATCCTAAAGCAAAGA
AACACTTACCTAAAATCAGATCAAAAAATAGATGAAACATTCCTTTCTGTGTTAGATGATCAGCTAGTTGATTATGGATG
TCGTGTAATGAATCACCGCTTAGATTTCATAAAAAAACTAGAATCATTTGGGCGTAAGAAACATTTTGAACTCTCTAATC
AGATCGAAGAGTTGTCAATATCCTATCAATCTTCTGTCAATATAACTGACAAACAAAACTTATCCGAATCTTTCAAAATT
GCTTTAGAAAAAAGTAAATCCAGAGATTTATTTAAAAAGAATACTGGTGTCGGTCCTCATCGAGATGACATTTCTTTTTA
TATAAATGGGATGGATGCTAGTTTCGGAAGCCAAGGTCAACATCGTAGTCTCGTCCTCTCGATAAAATTAGCAGAAATCG
AATTAATGGAAAGCATTACCACAGAATCTCCTATATTACTGCTTGACGATGTGATGAGTGAACTTGACAACACTAGACAA
TTAAAATTATTAGAAACGATTTCTCAATCAATCCAAACCTTTATCACAACAACAAGCTTAGACCATCTTCAAAATCTACC
AGAAAATCTAAGTATCTTCACTATTCAGGATGGTAAAGCTGCTGTAAATGGAAATTGA

Domains

Predicted by InterProScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (3-358)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Streptococcus pneumoniae R6	99.178	100	0.992
recF	Bacillus subtilis subsp. subtilis str. 168	45.628	100	0.458