Detailed information NTG0295911

Bioinformatically predicted

Overview

• Name: comR
• Type: Regulator
• Locus tag: EQH36_RS09305
• Genome accession: NZ_CP035244
• Coordinates: 1825717..1826616 (-)
• Length: 299 a.a.
• NCBI ID: WP_061758469.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain TVO_1901945
• Function: activate transcription of comX (predicted from homology) Competence regulation

Genomic Context

Location: 1820717..1831616

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EQH36_RS09280 (EQH36_09785)	rsmA	1820953..1821825 (-)	873	WP_001216878.1	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA	-
EQH36_RS11100	-	1822211..1822357 (-)	147	WP_000333269.1	hypothetical protein	-
EQH36_RS09290 (EQH36_09790)	-	1822350..1822991 (-)	642	WP_000565531.1	ABC transporter ATP-binding protein	-
EQH36_RS09295 (EQH36_09795)	-	1822993..1825023 (-)	2031	WP_000825268.1	bacteriocin-associated integral membrane family protein	-
EQH36_RS09300 (EQH36_09800)	-	1825100..1825396 (-)	297	WP_000815394.1	lactococcin 972 family bacteriocin	-
EQH36_RS09305 (EQH36_09805)	comR	1825717..1826616 (-)	900	WP_061758469.1	helix-turn-helix transcriptional regulator	Regulator
EQH36_RS09310 (EQH36_09810)	rnmV	1826688..1827248 (-)	561	WP_000664448.1	ribonuclease M5	-
EQH36_RS09315 (EQH36_09815)	-	1827248..1828021 (-)	774	WP_000575594.1	TatD family hydrolase	-
EQH36_RS09320 (EQH36_09825)	-	1828326..1829297 (-)	972	Protein_1854	DUF1542 domain-containing protein	-
EQH36_RS09325 (EQH36_09835)	rpmH	1829503..1829637 (-)	135	WP_000831905.1	50S ribosomal protein L34	-
EQH36_RS09330 (EQH36_09840)	-	1829782..1830996 (-)	1215	WP_000666469.1	pyridoxal phosphate-dependent aminotransferase	-
EQH36_RS09335 (EQH36_09845)	-	1831152..1831445 (-)	294	WP_000977374.1	hypothetical protein	-

Sequence

Protein

• Length: 299 a.a.
• Molecular weight: 35279.14 Da
• Isoelectric Point: 4.9762

>NTDB_id=295911 EQH36_RS09305 WP_061758469.1 1825717..1826616(-) (comR) [Streptococcus pneumoniae strain TVO_1901945]
MLIGQKIKEIRIEKGISRPDFCGDEQELTVRQLSRIESGASQPSLPKLAYIARRLGVPVYSLMPDFSALPSAYLELKYQI
LRELIYGKEEEYDKKEACLEEIYKTYFDNLPKEEQLACEVLQACLDTSRTRRPEYAELILEEHMPQIIEKEAYSINDMLL
IRLFFYQMLIRKDLAKFINQIEKLMLFLLEQKKVTQIENYFIIRDTLISGMCCLEKVGVTDCFNDYLSCLQEIMDKTQDY
QKKPLVFMFLWKQALRVERDFSLAESFYQSSKTFAKLIGDGFLVKKLTEEWQEDVKKYL

Nucleotide

• Length: 900 bp

>NTDB_id=295911 EQH36_RS09305 WP_061758469.1 1825717..1826616(-) (comR) [Streptococcus pneumoniae strain TVO_1901945]
ATGTTAATTGGTCAAAAAATTAAAGAGATTCGGATAGAAAAAGGAATTAGTCGTCCAGATTTTTGTGGAGATGAGCAAGA
ACTGACAGTTCGTCAACTGTCGCGAATTGAAAGTGGAGCTTCGCAACCGAGTTTGCCCAAGTTAGCCTATATTGCTCGCC
GGCTAGGAGTTCCAGTTTATAGCCTTATGCCGGATTTTTCAGCTCTTCCTTCTGCTTATTTAGAATTGAAATACCAGATT
TTACGTGAACTAATCTATGGTAAAGAAGAGGAGTACGATAAGAAGGAAGCGTGTTTGGAAGAGATTTATAAAACATACTT
TGATAATCTTCCTAAAGAAGAACAATTAGCATGTGAAGTATTGCAGGCGTGTTTGGATACTTCTAGAACTAGAAGGCCTG
AATATGCAGAGTTAATACTTGAGGAACATATGCCTCAGATTATAGAAAAAGAAGCTTATTCAATAAATGATATGTTGTTG
ATTCGTTTGTTTTTTTATCAAATGCTCATTAGAAAAGATCTTGCCAAATTTATAAATCAAATCGAAAAGCTAATGCTCTT
TCTTTTGGAACAGAAGAAGGTAACTCAAATAGAGAATTACTTTATAATTAGAGATACTCTTATTTCAGGAATGTGTTGTC
TTGAAAAGGTAGGAGTAACTGATTGTTTTAATGATTATCTATCGTGTTTACAAGAAATTATGGATAAAACTCAAGATTAT
CAAAAGAAACCTCTTGTATTTATGTTTTTGTGGAAGCAAGCATTAAGAGTAGAAAGAGATTTTAGTTTAGCTGAATCATT
TTATCAGTCTTCTAAAACATTTGCGAAGCTAATTGGAGATGGATTTCTAGTAAAGAAATTGACAGAGGAATGGCAAGAGG
ATGTCAAAAAATATTTATAA

Domains

Predicted by InterProScan.

• ComR tetratricopeptide (ComR_TPR) (70-291)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comR	Streptococcus suis P1/7	37.801	97.324	0.368
comR	Streptococcus suis 05ZYH33	37.801	97.324	0.368
comR	Streptococcus mutans UA159	37.415	98.328	0.368