Detailed information    

insolico Bioinformatically predicted

Overview


Name   comK/comK1   Type   Regulator
Locus tag   CFC57_RS05325 Genome accession   NZ_CP029751
Coordinates   1034212..1034781 (-) Length   189 a.a.
NCBI ID   WP_000287265.1    Uniprot ID   A0A7U7EXU5
Organism   Staphylococcus aureus strain Smith     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 1029212..1039781
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CFC57_RS05305 (CFC57_05525) - 1030715..1032073 (+) 1359 WP_000021871.1 TrkH family potassium uptake protein -
  CFC57_RS05310 (CFC57_05530) - 1032212..1033723 (+) 1512 WP_000414170.1 bifunctional UDP-sugar hydrolase/5'-nucleotidase -
  CFC57_RS05325 (CFC57_05545) comK/comK1 1034212..1034781 (-) 570 WP_000287265.1 competence protein ComK Regulator
  CFC57_RS05330 (CFC57_05550) - 1034991..1035209 (+) 219 WP_000876826.1 IDEAL domain-containing protein -
  CFC57_RS05335 (CFC57_05555) - 1035290..1036276 (-) 987 WP_000668817.1 lipoate--protein ligase -
  CFC57_RS05340 (CFC57_05560) - 1036475..1036651 (+) 177 WP_000214898.1 YkvS family protein -
  CFC57_RS05345 (CFC57_05565) - 1036666..1037272 (+) 607 Protein_1008 CPBP family glutamic-type intramembrane protease -
  CFC57_RS14795 (CFC57_05570) - 1037590..1037652 (+) 63 WP_228764722.1 hypothetical protein -
  CFC57_RS05355 (CFC57_05575) - 1038284..1038568 (+) 285 WP_000790905.1 lactococcin 972 family bacteriocin -

Sequence


Protein


Download         Length: 189 a.a.        Molecular weight: 22601.83 Da        Isoelectric Point: 9.6091

>NTDB_id=295878 CFC57_RS05325 WP_000287265.1 1034212..1034781(-) (comK/comK1) [Staphylococcus aureus strain Smith]
MYSQNIYVIRKGDMVIRPAFDDDDQRNGSEIIRFDKTRIQNPFKVQKIIERSCKFYGNTYLGKKAETNRITGISSKPPIL
LTPLFPTYFFPTHSDRQNENIWLNMHYIESIKELKNRKCKVTFINNESIILHVSYHSLWHQYNNSIFYYYMVDKQSRMIS
KNPDQPIDYNKATLNVFEALTRYSLFEDK

Nucleotide


Download         Length: 570 bp        

>NTDB_id=295878 CFC57_RS05325 WP_000287265.1 1034212..1034781(-) (comK/comK1) [Staphylococcus aureus strain Smith]
ATGTATTCTCAAAATATTTATGTGATACGCAAAGGAGACATGGTTATTCGACCAGCATTTGATGATGACGATCAAAGAAA
TGGTAGTGAAATAATTCGGTTTGACAAAACGCGTATTCAAAATCCTTTTAAAGTCCAGAAAATCATTGAACGCTCTTGCA
AATTTTATGGTAATACTTATCTTGGCAAGAAAGCAGAGACAAACCGCATTACTGGCATTTCTAGTAAACCACCTATTTTA
CTAACACCATTATTTCCAACTTATTTTTTCCCAACACATTCTGACAGACAAAATGAAAATATTTGGTTAAATATGCATTA
TATCGAAAGTATTAAAGAATTAAAAAATCGTAAATGTAAAGTGACATTTATTAATAATGAATCAATCATTCTTCATGTTT
CATACCACAGTTTATGGCATCAATATAACAATTCCATTTTTTACTATTACATGGTAGATAAACAATCTCGCATGATATCA
AAAAATCCCGACCAACCAATAGATTATAATAAAGCCACATTGAATGTGTTTGAAGCATTGACACGCTATTCTTTATTTGA
AGATAAATAA

Domains


Predicted by InterproScan.

(5-156)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A7U7EXU5

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comK/comK1 Staphylococcus aureus MW2

100

100

1

  comK/comK1 Staphylococcus aureus N315

100

100

1


Multiple sequence alignment