Detailed information NTG0295698

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: EQH38_RS10665
• Genome accession: NZ_CP035242
• Coordinates: 2110315..2111412 (+)
• Length: 365 a.a.
• NCBI ID: WP_000266661.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain TVO_1901947
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2105315..2116412

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EQH38_RS10640 (EQH38_11265)	pgsA	2105836..2106381 (-)	546	WP_000712132.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-
EQH38_RS10645 (EQH38_11270)	rodZ	2106392..2107213 (-)	822	WP_001227958.1	cytoskeleton protein RodZ	-
EQH38_RS10650 (EQH38_11275)	yfmH	2107255..2108538 (-)	1284	WP_000170228.1	EF-P 5-aminopentanol modification-associated protein YfmH	-
EQH38_RS10655 (EQH38_11280)	yfmF	2108535..2109785 (-)	1251	WP_000424261.1	EF-P 5-aminopentanol modification-associated protein YfmF	-
EQH38_RS10660 (EQH38_11285)	-	2109944..2110312 (+)	369	WP_000455898.1	RNA-binding S4 domain-containing protein	-
EQH38_RS10665 (EQH38_11290)	recF	2110315..2111412 (+)	1098	WP_000266661.1	DNA replication/repair protein RecF	Machinery gene
EQH38_RS10670 (EQH38_11295)	guaB	2111463..2112941 (-)	1479	WP_000073428.1	IMP dehydrogenase	-
EQH38_RS10675 (EQH38_11300)	trpS	2113093..2114118 (-)	1026	WP_050095697.1	tryptophan--tRNA ligase	-
EQH38_RS10680 (EQH38_11305)	-	2114324..2115946 (+)	1623	WP_000958770.1	ATP-binding cassette domain-containing protein	-

Sequence

Protein

• Length: 365 a.a.
• Molecular weight: 41999.13 Da
• Isoelectric Point: 9.3081

>NTDB_id=295698 EQH38_RS10665 WP_000266661.1 2110315..2111412(+) (recF) [Streptococcus pneumoniae strain TVO_1901947]
MWLQHLSLKTFRNYKETKIDFNPKLNVFLGRNAQGKTNMLEAIYFLALTRSHRTRTDKNLIHFDEEQLHLSGLVQKKTGS
IPLEIELTQKGRVTKVNHLKQARLSDYVGHMNVVLFAPEDLQLIKGAPSIRRKFIDMELGQIKPIYLSDLTNYNHILKQR
NTYLKSAQKIDETFLSVLDDQLVDYGCRVMNHRLDFIKKLESFGRKKHFELSNQIEELSISYQSSVNITDKQNLSESFKI
ALEKSRSRDLFKKNTGVGPHRDDISFYINGMDASFGSQGQHRSLVLSIKLAEIELMESITTESPILLLDDVMSELDNTRQ
LKLLETISQSIQTFITTTSLDHLQNLPENLSIFTIQDGKAAVNRN

Nucleotide

• Length: 1098 bp

>NTDB_id=295698 EQH38_RS10665 WP_000266661.1 2110315..2111412(+) (recF) [Streptococcus pneumoniae strain TVO_1901947]
ATGTGGCTACAACATCTATCTCTCAAGACTTTTCGTAATTACAAAGAAACGAAAATAGACTTTAATCCTAAATTGAATGT
CTTTTTGGGACGTAATGCACAAGGAAAAACAAACATGTTAGAGGCTATCTATTTTTTAGCCTTAACGCGTAGTCATCGAA
CTCGAACAGATAAAAATCTCATTCATTTTGATGAGGAACAACTTCATCTTTCAGGTCTCGTTCAGAAAAAAACTGGATCC
ATTCCCCTAGAAATCGAACTAACACAAAAAGGCCGTGTAACAAAAGTTAATCACTTAAAACAGGCACGCCTTTCAGATTA
TGTAGGACACATGAATGTTGTCTTATTTGCTCCTGAAGATTTACAACTAATTAAAGGAGCACCTTCGATTCGACGAAAAT
TCATTGATATGGAACTTGGGCAAATTAAGCCAATCTATTTATCTGACTTAACCAATTATAACCACATCCTAAAGCAAAGA
AACACTTACCTAAAATCAGCTCAAAAAATAGATGAAACATTCCTTTCTGTGTTAGATGATCAGCTAGTTGATTATGGATG
TCGTGTAATGAATCACCGCTTAGATTTCATAAAAAAACTAGAATCATTTGGGCGTAAGAAACATTTTGAACTCTCTAATC
AGATCGAAGAGTTGTCAATATCCTATCAATCTTCTGTCAATATAACTGACAAACAAAACTTATCCGAATCTTTCAAAATT
GCTTTAGAAAAAAGTAGATCCAGAGATTTATTTAAAAAGAATACTGGTGTCGGTCCTCATCGAGATGACATTTCTTTTTA
TATAAATGGGATGGATGCTAGTTTCGGAAGCCAAGGTCAACATCGTAGTCTCGTCCTCTCGATAAAATTAGCAGAAATCG
AATTAATGGAAAGCATTACCACAGAATCTCCGATATTACTGCTTGACGATGTGATGAGTGAACTTGACAACACTAGACAG
TTAAAATTATTAGAAACGATTTCTCAATCAATCCAAACCTTTATCACAACAACAAGCTTAGACCATCTTCAAAATCTGCC
AGAAAATCTAAGTATCTTCACTATTCAGGATGGTAAAGCTGCTGTAAATAGAAATTGA

Domains

Predicted by InterProScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (3-358)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Streptococcus pneumoniae R6	99.452	100	0.995
recF	Bacillus subtilis subsp. subtilis str. 168	45.902	100	0.46