Detailed information NTG0295591

Bioinformatically predicted

Overview

• Name: comR
• Type: Regulator
• Locus tag: EQH38_RS00480
• Genome accession: NZ_CP035242
• Coordinates: 77607..78500 (+)
• Length: 297 a.a.
• NCBI ID: WP_000343888.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain TVO_1901947
• Function: activate transcription of comX (predicted from homology) Competence regulation

Genomic Context

Location: 72607..83500

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EQH38_RS00445 (EQH38_00460)	-	72920..74089 (+)	1170	WP_000366343.1	pyridoxal phosphate-dependent aminotransferase	-
EQH38_RS00450 (EQH38_00465)	recO	74086..74856 (+)	771	WP_000616159.1	DNA repair protein RecO	Machinery gene
EQH38_RS00455 (EQH38_00470)	plsX	74853..75845 (+)	993	WP_000717456.1	phosphate acyltransferase PlsX	-
EQH38_RS00460 (EQH38_00475)	-	75851..76084 (+)	234	WP_000136447.1	acyl carrier protein	-
EQH38_RS00465 (EQH38_00480)	-	76121..76420 (+)	300	Protein_89	transposase family protein	-
EQH38_RS00470 (EQH38_00485)	blpU	76623..76853 (+)	231	WP_001093076.1	bacteriocin-like peptide BlpU	-
EQH38_RS10755	-	76856..76981 (+)	126	WP_000346297.1	PncF family bacteriocin immunity protein	-
EQH38_RS00475 (EQH38_00490)	-	77392..77586 (+)	195	WP_000756776.1	hypothetical protein	-
EQH38_RS00480 (EQH38_00495)	comR	77607..78500 (+)	894	WP_000343888.1	XRE family transcriptional regulator	Regulator
EQH38_RS00485 (EQH38_00500)	-	79030..79326 (+)	297	WP_000837726.1	uberolysin/carnocyclin family circular bacteriocin	-
EQH38_RS00490 (EQH38_00505)	-	79333..80469 (+)	1137	WP_000698828.1	hypothetical protein	-
EQH38_RS00495 (EQH38_00510)	-	80466..80948 (+)	483	WP_001232094.1	stage II sporulation protein M	-
EQH38_RS00500 (EQH38_00515)	-	80945..81541 (+)	597	WP_000687787.1	ATP-binding cassette domain-containing protein	-
EQH38_RS00505 (EQH38_00520)	-	81522..82013 (+)	492	WP_000671990.1	hypothetical protein	-

Sequence

Protein

• Length: 297 a.a.
• Molecular weight: 34517.01 Da
• Isoelectric Point: 4.6498

>NTDB_id=295591 EQH38_RS00480 WP_000343888.1 77607..78500(+) (comR) [Streptococcus pneumoniae strain TVO_1901947]
MDELKREIGYKIKTIRRSCGKTQIDICGDESELTIRQLARIENGQALATLPKLLLIADKLGVSLQNIVDVKVIEIPKGFL
KLKDELIHSQTYADKGRIERKEAILEEIYENYYENLPEEEQLIVDVTQARFDIYGSSDVTYGLGLVEEYFQQLLKKKYFS
VNDLLIIELYFFCCAMGLEDKEHFEELAQKVLLCSEYEDKASLVQMEKVLLSLFIQIQTEDSLIYIQTFEKIIAKTRHVF
YRPHLFLLKAKYALFVDKNILEAESFYEKAISLAELLDDQVLVQRILAEKQIDFPTT

Nucleotide

• Length: 894 bp

>NTDB_id=295591 EQH38_RS00480 WP_000343888.1 77607..78500(+) (comR) [Streptococcus pneumoniae strain TVO_1901947]
ATGGATGAGTTGAAACGTGAAATTGGTTATAAAATCAAAACTATTAGGCGATCTTGTGGAAAAACTCAGATAGATATTTG
TGGTGATGAATCAGAGTTGACGATTCGTCAGCTAGCACGTATTGAAAATGGGCAAGCTTTAGCAACACTTCCTAAATTAT
TATTGATTGCGGATAAACTTGGAGTATCATTACAGAATATTGTGGATGTTAAGGTTATAGAGATTCCAAAAGGATTCCTA
AAACTCAAAGATGAGCTGATTCATTCTCAAACCTACGCTGATAAGGGAAGAATCGAACGAAAAGAAGCTATACTTGAGGA
AATATATGAAAACTATTATGAGAATTTGCCTGAGGAAGAGCAGTTAATTGTGGATGTGACACAAGCTCGTTTTGATATTT
ATGGTAGTTCAGATGTGACCTACGGTTTAGGGTTAGTGGAAGAATATTTCCAGCAGTTATTAAAAAAGAAATATTTTTCT
GTAAATGATTTGTTGATTATTGAATTGTATTTCTTTTGTTGTGCTATGGGATTAGAAGATAAAGAACATTTTGAGGAGTT
AGCTCAAAAAGTATTGCTATGTTCAGAATATGAAGATAAGGCTAGCCTAGTTCAAATGGAAAAAGTTCTTCTGAGCCTAT
TTATCCAAATTCAGACAGAGGATAGTCTGATATATATTCAAACATTTGAGAAAATTATTGCTAAAACAAGACATGTTTTT
TACCGACCTCATCTATTTTTGCTAAAGGCAAAATATGCTTTATTTGTAGACAAGAATATTTTAGAGGCAGAAAGTTTCTA
TGAAAAGGCGATTTCTCTAGCAGAATTGCTAGACGATCAGGTATTAGTTCAGAGAATTTTAGCAGAAAAACAGATAGATT
TCCCAACAACCTGA

Domains

Predicted by InterProScan.

• ComR tetratricopeptide (ComR_TPR) (76-289)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comR	Streptococcus mutans UA159	36.667	100	0.37