Detailed information NTG0295461

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: EQH41_RS10770
• Genome accession: NZ_CP035239
• Coordinates: 2137626..2138723 (+)
• Length: 365 a.a.
• NCBI ID: WP_000266660.1
• Uniprot ID: Q97N44
• Organism: Streptococcus pneumoniae strain TVO_TIGR4
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2132626..2143723

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EQH41_RS10745 (EQH41_11430)	pgsA	2133147..2133692 (-)	546	WP_000712132.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-
EQH41_RS10750 (EQH41_11435)	rodZ	2133703..2134524 (-)	822	WP_001227958.1	cytoskeleton protein RodZ	-
EQH41_RS10755 (EQH41_11440)	yfmH	2134566..2135849 (-)	1284	WP_000170214.1	EF-P 5-aminopentanol modification-associated protein YfmH	-
EQH41_RS10760 (EQH41_11445)	yfmF	2135846..2137096 (-)	1251	WP_000424267.1	EF-P 5-aminopentanol modification-associated protein YfmF	-
EQH41_RS10765 (EQH41_11450)	yaaA	2137255..2137623 (+)	369	WP_000455867.1	S4 domain-containing protein YaaA	-
EQH41_RS10770 (EQH41_11455)	recF	2137626..2138723 (+)	1098	WP_000266660.1	DNA replication/repair protein RecF	Machinery gene
EQH41_RS10775 (EQH41_11460)	guaB	2138774..2140252 (-)	1479	WP_000073428.1	IMP dehydrogenase	-
EQH41_RS10780 (EQH41_11465)	trpS	2140404..2141429 (-)	1026	WP_000165444.1	tryptophan--tRNA ligase	-
EQH41_RS10785 (EQH41_11470)	-	2141635..2143257 (+)	1623	WP_000958770.1	ATP-binding cassette domain-containing protein	-

Sequence

Protein

• Length: 365 a.a.
• Molecular weight: 41900.00 Da
• Isoelectric Point: 9.0596

>NTDB_id=295461 EQH41_RS10770 WP_000266660.1 2137626..2138723(+) (recF) [Streptococcus pneumoniae strain TVO_TIGR4]
MWLQHLSLKTFRNYKETKIDFNPKLNVFLGRNAQGKTNMLEAIYFLALTRSHRTRTDKNLIHFDEEQLHLSGLVQKKTGS
IPLEIELTQKGRVTKVNHLKQARLSDYVGHMNVVLFAPEDLQLIKGAPSIRRKFIDMELGQIKPIYLSDLTNYNHILKQR
NTYLKSAQKIDETFLSVLDDQLVDYGCRVMNHRLDFIKKLESFGRKKHFELSNQIEELSISYQSSVNITDKQNLSESFKI
ALEKSRSRDLFKKNTGVGPHRDDISFYINGMDASFGSQGQHRSLVLSIKLAEIELMESITTESPILLLDDVMSELDNTRQ
LKLLETISQSIQTFITTTSLDHLQNLPENLSIFTIQDGKAAVNGN

Nucleotide

• Length: 1098 bp

>NTDB_id=295461 EQH41_RS10770 WP_000266660.1 2137626..2138723(+) (recF) [Streptococcus pneumoniae strain TVO_TIGR4]
ATGTGGCTACAACATCTATCTCTCAAGACTTTTCGTAATTACAAAGAAACGAAAATAGACTTTAATCCTAAATTGAATGT
CTTTTTGGGACGTAATGCACAAGGAAAAACAAACATGTTAGAGGCTATCTATTTTTTAGCCTTAACGCGTAGTCATCGAA
CTCGAACAGATAAAAATCTCATTCATTTTGATGAGGAACAACTTCATCTTTCAGGTCTCGTTCAGAAAAAAACTGGATCC
ATTCCCCTAGAAATCGAACTAACACAAAAAGGTCGTGTAACAAAAGTTAATCACTTAAAACAGGCACGCCTTTCAGATTA
TGTAGGACACATGAATGTTGTCTTATTTGCTCCTGAAGATTTACAACTAATTAAAGGAGCACCTTCGATTCGACGAAAAT
TCATTGATATGGAACTTGGGCAAATTAAGCCAATCTATTTATCTGACTTAACCAATTATAACCACATCCTAAAGCAAAGA
AACACTTACCTAAAATCAGCTCAAAAAATAGATGAAACATTCCTTTCTGTGTTAGATGATCAGCTAGTTGATTATGGATG
TCGTGTAATGAATCACCGCTTAGATTTCATAAAAAAACTAGAATCATTTGGGCGTAAGAAACATTTTGAACTCTCTAATC
AGATCGAAGAGTTGTCAATATCCTATCAATCTTCTGTCAATATAACTGACAAACAAAACTTATCCGAATCTTTCAAAATT
GCTTTAGAAAAAAGTAGATCCAGAGATTTATTTAAAAAGAATACTGGTGTCGGTCCTCATCGAGATGACATTTCTTTTTA
TATAAATGGGATGGATGCTAGTTTCGGAAGCCAAGGTCAACATCGTAGTCTCGTCCTCTCGATAAAATTAGCAGAAATCG
AATTAATGGAAAGCATTACCACAGAATCTCCTATATTACTGCTTGACGATGTGATGAGTGAACTTGACAACACTAGACAG
TTAAAATTATTAGAAACGATTTCTCAATCAATCCAAACCTTTATCACAACAACAAGCTTAGACCATCTTCAAAATCTGCC
AGAAAATCTAAGTATCTTCACTATTCAGGATGGTAAAGCTGCTGTAAATGGAAATTGA

Domains

Predicted by InterProScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (3-358)

3D structure

• AlphaFold DB: Q97N44

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Streptococcus pneumoniae R6	99.726	100	0.997
recF	Bacillus subtilis subsp. subtilis str. 168	45.902	100	0.46