Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   DMC40_RS07685 Genome accession   NZ_CP029694
Coordinates   1452653..1453462 (-) Length   269 a.a.
NCBI ID   WP_002985641.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain ABC020055975     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1447653..1458462
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DMC40_RS07675 (DMC40_07675) smc 1447990..1451517 (-) 3528 WP_011054270.1 chromosome segregation protein SMC -
  DMC40_RS07680 (DMC40_07680) rnc 1451518..1452210 (-) 693 WP_002990670.1 ribonuclease III -
  DMC40_RS07685 (DMC40_07685) vicX 1452653..1453462 (-) 810 WP_002985641.1 MBL fold metallo-hydrolase Regulator
  DMC40_RS07690 (DMC40_07690) vicK 1453466..1454818 (-) 1353 WP_002995609.1 cell wall metabolism sensor histidine kinase VicK Regulator
  DMC40_RS07695 (DMC40_07695) vicR 1454811..1455521 (-) 711 WP_002985645.1 response regulator YycF Regulator
  DMC40_RS07700 (DMC40_07700) - 1455683..1456678 (-) 996 WP_011054269.1 DUF3114 domain-containing protein -
  DMC40_RS07705 (DMC40_07705) - 1456774..1458021 (-) 1248 WP_011054268.1 AMP-binding protein -

Sequence

Protein


Download         Length: 269 a.a.        Molecular weight: 30095.20 Da        Isoelectric Point: 5.5314

>NTDB_id=295436 DMC40_RS07685 WP_002985641.1 1452653..1453462(-) (vicX) [Streptococcus pyogenes strain ABC020055975]
MNESGFKYSILASGSTGNCFYLETPKKRLLIDAGLTGKKITSLLAEIDRKPEDLDAILITHEHSDHIKGVGVMARKYHLD
IYANEKTWQLMDECNMLGKLDASQKHIFQRDKVLTFGDVDIESFGVSHDAIDPQFYRIMKDNKSFVMLTDTGYVSDRMTG
IIENADGYLIESNHDIEILRSGSYPWSLKQRILSDLGHLSNEDGAGAMIRSLGYNTKKIYLGHLSKENNIKELAHMTMVN
QLAMADLAVGTDFTVHDTSPDTACPLTDI

Nucleotide


Download         Length: 810 bp        

>NTDB_id=295436 DMC40_RS07685 WP_002985641.1 1452653..1453462(-) (vicX) [Streptococcus pyogenes strain ABC020055975]
ATGAATGAGAGTGGTTTTAAATATAGTATTTTAGCATCTGGGTCCACAGGAAATTGTTTTTATTTAGAAACACCTAAAAA
ACGCTTATTGATTGATGCAGGGCTTACTGGTAAGAAAATTACCAGTCTTCTTGCTGAAATTGACCGCAAACCTGAGGATT
TGGATGCTATTTTGATTACCCATGAGCACTCTGACCATATTAAGGGTGTAGGCGTTATGGCCCGCAAATACCATTTGGAT
ATCTATGCTAATGAAAAAACATGGCAGCTGATGGATGAGTGCAATATGCTAGGTAAGCTTGATGCCTCACAAAAACATAT
TTTCCAAAGGGATAAAGTTTTGACCTTTGGAGATGTTGATATCGAAAGTTTTGGAGTCAGCCATGACGCTATTGATCCTC
AATTTTATCGGATTATGAAAGATAATAAGTCTTTTGTGATGTTGACAGATACAGGATATGTCAGTGATAGGATGACAGGT
ATTATTGAAAATGCAGATGGCTACTTGATTGAATCCAATCATGATATTGAAATTTTGAGATCAGGCTCTTATCCTTGGAG
CTTGAAGCAGCGTATTTTATCTGATTTAGGACATTTATCAAATGAAGATGGAGCGGGAGCCATGATTAGAAGCCTGGGGT
ACAATACCAAAAAAATATACCTAGGTCATCTGAGTAAAGAAAATAACATCAAAGAGTTAGCGCATATGACGATGGTCAAT
CAACTGGCTATGGCAGATTTAGCAGTAGGTACAGACTTTACGGTCCATGATACCTCTCCAGATACTGCTTGTCCATTAAC
TGATATTTGA

Domains

Predicted by InterproScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(15-223)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

75.836

100

0.758

Multiple sequence alignment