Detailed information NTG0295223

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: EQH43_RS10700
• Genome accession: NZ_CP035237
• Coordinates: 2096493..2097590 (+)
• Length: 365 a.a.
• NCBI ID: WP_000266662.1
• Uniprot ID: Q8DMX3
• Organism: Streptococcus pneumoniae strain TVO_Taiwan19F-14
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2091493..2102590

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EQH43_RS10675 (EQH43_11220)	pgsA	2092014..2092559 (-)	546	WP_000712136.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-
EQH43_RS10680 (EQH43_11225)	rodZ	2092570..2093391 (-)	822	WP_001227958.1	cytoskeleton protein RodZ	-
EQH43_RS10685 (EQH43_11230)	yfmH	2093433..2094716 (-)	1284	WP_000170193.1	EF-P 5-aminopentanol modification-associated protein YfmH	-
EQH43_RS10690 (EQH43_11235)	yfmF	2094713..2095963 (-)	1251	WP_000424257.1	EF-P 5-aminopentanol modification-associated protein YfmF	-
EQH43_RS10695 (EQH43_11240)	yaaA	2096122..2096490 (+)	369	WP_000455903.1	S4 domain-containing protein YaaA	-
EQH43_RS10700 (EQH43_11245)	recF	2096493..2097590 (+)	1098	WP_000266662.1	DNA replication/repair protein RecF	Machinery gene
EQH43_RS10705 (EQH43_11250)	guaB	2097641..2099119 (-)	1479	WP_000073428.1	IMP dehydrogenase	-
EQH43_RS10710 (EQH43_11255)	trpS	2099271..2100296 (-)	1026	WP_000165444.1	tryptophan--tRNA ligase	-
EQH43_RS10715 (EQH43_11260)	-	2100502..2102124 (+)	1623	WP_000958770.1	ATP-binding cassette domain-containing protein	-

Sequence

Protein

• Length: 365 a.a.
• Molecular weight: 41916.00 Da
• Isoelectric Point: 9.0596

>NTDB_id=295223 EQH43_RS10700 WP_000266662.1 2096493..2097590(+) (recF) [Streptococcus pneumoniae strain TVO_Taiwan19F-14]
MWLQHLSLKTFRNYKETKIDFNPKLNVFLGRNAQGKTNMLEAIYFLALTRSHRTRTDKNLIHFDEEQLHLSGLVQKKTGS
IPLEIELTQKGRVTKVNHLKQARLSDYVGHMNVVLFAPEDLQLIKGAPSIRRKFIDMELGQIKPIYLSDLTNYNHILKQR
NTYLKSAQKIDETFLSVLDDQLVDYGCRVMNHRLDFIKKLESFGRKKHFELSNQIEELSISYQSSVNITDKQNLSESFKI
ALEKSRSRDLFKKNTGVGPHRDDISFYINGMDASFGSQGQHRSLVLSIKLAEIELMESITTESPILLLDDVMSELDNTRQ
LKLLETISQSIQTFITTTSLDHLQNLPENLSIFTIQDGKASVNGN

Nucleotide

• Length: 1098 bp

>NTDB_id=295223 EQH43_RS10700 WP_000266662.1 2096493..2097590(+) (recF) [Streptococcus pneumoniae strain TVO_Taiwan19F-14]
ATGTGGCTACAACATCTATCTCTCAAGACTTTTCGTAATTACAAAGAAACGAAAATAGACTTTAATCCTAAATTGAATGT
CTTTTTGGGACGTAATGCACAAGGAAAAACAAACATGTTAGAGGCTATCTATTTTTTAGCCTTAACGCGTAGTCATCGAA
CTCGAACAGATAAAAATCTCATTCATTTTGATGAGGAACAACTTCATCTTTCAGGTCTCGTTCAGAAAAAAACTGGATCC
ATTCCCCTAGAAATCGAACTAACACAAAAAGGCCGTGTAACAAAAGTTAATCACTTAAAACAGGCACGCCTTTCAGATTA
TGTAGGACACATGAATGTTGTCTTATTTGCTCCTGAAGATTTACAACTAATTAAAGGAGCACCTTCGATTCGACGAAAAT
TCATTGATATGGAACTTGGGCAAATTAAGCCAATCTATTTATCTGACTTAACCAATTATAACCACATCCTAAAGCAAAGA
AACACTTACCTAAAATCAGCTCAAAAAATAGATGAAACATTCCTTTCTGTGTTAGATGATCAGCTAGTTGATTATGGATG
TCGTGTAATGAATCACCGCTTAGATTTCATAAAAAAACTAGAATCATTTGGGCGTAAGAAACATTTTGAACTCTCTAATC
AGATCGAAGAGTTGTCAATATCCTATCAATCTTCTGTCAATATAACTGACAAACAAAACTTATCCGAATCTTTCAAAATT
GCTTTAGAAAAAAGTAGATCCAGAGATTTATTTAAAAAGAATACTGGTGTCGGTCCTCATCGAGATGACATTTCTTTTTA
TATAAATGGGATGGATGCTAGTTTCGGAAGCCAAGGTCAACATCGTAGTCTCGTCCTCTCGATAAAATTAGCAGAAATCG
AATTAATGGAAAGCATTACCACAGAATCTCCTATATTACTGCTTGACGATGTGATGAGTGAACTTGACAACACTAGACAG
TTAAAATTATTAGAAACGATTTCTCAATCAATCCAAACCTTTATCACAACAACAAGCTTAGACCATCTTCAAAATCTGCC
AGAAAATCTAAGTATCTTCACTATTCAGGATGGTAAAGCTTCTGTAAATGGAAATTGA

Domains

Predicted by InterProScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (3-358)

3D structure

• AlphaFold DB: Q8DMX3

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Streptococcus pneumoniae R6	100	100	1
recF	Bacillus subtilis subsp. subtilis str. 168	45.902	100	0.46