Detailed information NTG0295083

Bioinformatically predicted

Overview

• Name: comR
• Type: Regulator
• Locus tag: EQH44_RS09255
• Genome accession: NZ_CP035236
• Coordinates: 1831411..1832310 (-)
• Length: 299 a.a.
• NCBI ID: WP_000904863.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain TVO_1902282
• Function: activate transcription of comX (predicted from homology) Competence regulation

Genomic Context

Location: 1826411..1837310

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EQH44_RS09235 (EQH44_09770)	rsmA	1827165..1828037 (-)	873	WP_001216868.1	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA	-
EQH44_RS09240 (EQH44_09775)	-	1828168..1828476 (-)	309	WP_000333257.1	hypothetical protein	-
EQH44_RS09245 (EQH44_09780)	-	1828469..1829110 (-)	642	WP_000565533.1	ABC transporter ATP-binding protein	-
EQH44_RS09250 (EQH44_09785)	-	1829112..1831142 (-)	2031	WP_000825274.1	bacteriocin-associated integral membrane family protein	-
EQH44_RS09255 (EQH44_09790)	comR	1831411..1832310 (-)	900	WP_000904863.1	helix-turn-helix transcriptional regulator	Regulator
EQH44_RS09260 (EQH44_09795)	rnmV	1832382..1832942 (-)	561	WP_000660012.1	ribonuclease M5	-
EQH44_RS09265 (EQH44_09800)	-	1832942..1833715 (-)	774	WP_000575633.1	TatD family hydrolase	-
EQH44_RS09270 (EQH44_09810)	-	1834020..1834991 (-)	972	Protein_1844	DUF1542 domain-containing protein	-
EQH44_RS09275 (EQH44_09815)	rpmH	1835197..1835331 (-)	135	WP_000831905.1	50S ribosomal protein L34	-
EQH44_RS09280 (EQH44_09820)	-	1835476..1836690 (-)	1215	WP_000666469.1	pyridoxal phosphate-dependent aminotransferase	-
EQH44_RS09285 (EQH44_09825)	-	1836846..1837139 (-)	294	WP_000977372.1	hypothetical protein	-

Sequence

Protein

• Length: 299 a.a.
• Molecular weight: 35313.07 Da
• Isoelectric Point: 4.8952

>NTDB_id=295083 EQH44_RS09255 WP_000904863.1 1831411..1832310(-) (comR) [Streptococcus pneumoniae strain TVO_1902282]
MLIGQKIKEIRIEKGISRPDFCGDEQELTVRQLSRIESGASQPSLPKLDYIARRLGVPVYSLMPDFSALPSAYLELKYQI
LREPIYGKEEEYDKKEACLEEIYKTYFDNLPKEEQLACEVLQACLDTSRTRRPEYAELILEEHMSQIIEKEVYSTNDMLL
IRLFFYQMLIRKDLAKFINQIEKLMLFLLEQKKVTQIENYFIIRDTLISGMCCLEKVGVTDCFNDYLSCLQEIMDKTQDY
QKKPLVFMFLWKQALRVERDFSLAESFYQSSKTFAKLIGDGFLVKKLTEEWQEDVKKYL

Nucleotide

• Length: 900 bp

>NTDB_id=295083 EQH44_RS09255 WP_000904863.1 1831411..1832310(-) (comR) [Streptococcus pneumoniae strain TVO_1902282]
ATGTTAATTGGTCAAAAAATTAAAGAGATTCGGATAGAAAAAGGAATTAGTCGTCCAGATTTTTGTGGAGATGAGCAAGA
ACTGACAGTTCGTCAACTGTCGCGAATTGAAAGTGGAGCTTCGCAACCGAGTTTGCCCAAGTTAGACTATATTGCTCGCC
GGCTAGGAGTTCCAGTTTATAGCCTTATGCCGGATTTTTCAGCTCTTCCTTCTGCTTATTTAGAATTGAAATACCAGATT
TTACGTGAACCAATCTATGGTAAAGAAGAGGAGTACGATAAGAAGGAAGCGTGTTTGGAAGAGATTTATAAAACATACTT
TGATAATCTTCCTAAAGAAGAACAATTAGCATGTGAAGTATTGCAGGCGTGTTTGGATACTTCTAGAACTAGAAGGCCTG
AATATGCAGAGTTAATACTTGAGGAACATATGTCTCAGATCATAGAAAAAGAAGTTTATTCAACAAATGATATGTTGTTG
ATTCGTTTGTTTTTTTATCAAATGCTCATTAGAAAAGATCTTGCCAAATTTATAAATCAAATCGAAAAGCTAATGCTCTT
TCTTTTGGAACAGAAGAAGGTAACTCAAATAGAGAATTACTTTATAATTAGAGATACTCTTATTTCAGGAATGTGTTGTC
TTGAAAAGGTAGGAGTAACTGATTGTTTTAATGATTATCTATCGTGTTTACAAGAAATTATGGATAAAACTCAAGATTAT
CAAAAGAAACCTCTTGTATTTATGTTTTTGTGGAAGCAAGCATTAAGAGTAGAAAGAGATTTTAGTTTAGCTGAATCATT
TTATCAGTCTTCTAAAACATTTGCGAAGCTAATTGGAGATGGATTTCTAGTAAAGAAATTGACAGAGGAATGGCAAGAGG
ATGTCAAAAAATATTTATAA

Domains

Predicted by InterProScan.

• ComR tetratricopeptide (ComR_TPR) (70-291)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comR	Streptococcus mutans UA159	37.755	98.328	0.371
comR	Streptococcus suis P1/7	38.144	97.324	0.371
comR	Streptococcus suis 05ZYH33	38.144	97.324	0.371