Detailed information NTG0294989

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: EQH45_RS10945
• Genome accession: NZ_CP035235
• Coordinates: 2134634..2135731 (+)
• Length: 365 a.a.
• NCBI ID: WP_000266666.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain TVO_1902276
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2129634..2140731

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EQH45_RS10920 (EQH45_11460)	pgsA	2130155..2130700 (-)	546	WP_000712132.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-
EQH45_RS10925 (EQH45_11465)	rodZ	2130711..2131532 (-)	822	WP_001227958.1	cytoskeleton protein RodZ	-
EQH45_RS10930 (EQH45_11470)	yfmH	2131574..2132857 (-)	1284	WP_000170219.1	EF-P 5-aminopentanol modification-associated protein YfmH	-
EQH45_RS10935 (EQH45_11475)	yfmF	2132854..2134104 (-)	1251	WP_000424271.1	EF-P 5-aminopentanol modification-associated protein YfmF	-
EQH45_RS10940 (EQH45_11480)	yaaA	2134263..2134631 (+)	369	WP_000455903.1	S4 domain-containing protein YaaA	-
EQH45_RS10945 (EQH45_11485)	recF	2134634..2135731 (+)	1098	WP_000266666.1	DNA replication/repair protein RecF	Machinery gene
EQH45_RS10950 (EQH45_11490)	guaB	2135782..2137260 (-)	1479	WP_000073424.1	IMP dehydrogenase	-
EQH45_RS10955 (EQH45_11495)	trpS	2137412..2138437 (-)	1026	WP_000165444.1	tryptophan--tRNA ligase	-
EQH45_RS10960 (EQH45_11500)	-	2138643..2140265 (+)	1623	WP_000958770.1	ATP-binding cassette domain-containing protein	-

Sequence

Protein

• Length: 365 a.a.
• Molecular weight: 41915.99 Da
• Isoelectric Point: 8.6711

>NTDB_id=294989 EQH45_RS10945 WP_000266666.1 2134634..2135731(+) (recF) [Streptococcus pneumoniae strain TVO_1902276]
MWLQHLSLKTFRNYKETKIDFNPKLNVFLGRNAQGKTNMLEAIYFLALTRSHRTRTDKNLIHFDEEQLHLSGLVQKKTGS
IPLEIELTQKGRVTKVNHLKQARLSDYVGHMNVVLFAPEDLQLIKGAPSIRRKFIDMELGQIKPIYLSDLTNYNHILKQR
NTYLKSDQKIDETFLSVLDDQLVDYGCRVMNHRLDFIKKLESFGRKKHFELSNQIEELSISYQSSVNITDKQNLSESFKI
ALEKSKSRDLFKKNTGVGPHRDDISFYINGMDASFGSQGQHRSLVLSIKLAEIELMESITTESPILLLDDVMSELDNTRQ
LKLLETISQSIQTFITTTSLDHLQNLPENLSIFTIQDGKAAVNGN

Nucleotide

• Length: 1098 bp

>NTDB_id=294989 EQH45_RS10945 WP_000266666.1 2134634..2135731(+) (recF) [Streptococcus pneumoniae strain TVO_1902276]
ATGTGGCTACAACATCTATCTCTCAAGACTTTTCGTAATTACAAAGAAACGAAAATAGACTTTAATCCTAAATTGAATGT
CTTTTTGGGACGTAATGCACAAGGAAAAACAAACATGTTAGAGGCTATCTATTTTTTAGCCTTAACGCGTAGTCATCGAA
CTCGAACAGATAAAAATCTCATTCATTTTGATGAGGAACAACTTCATCTTTCAGGTCTCGTTCAGAAAAAAACTGGATCC
ATTCCCCTAGAAATCGAACTAACACAAAAAGGCCGTGTAACAAAAGTTAATCACTTAAAACAGGCACGCCTTTCAGATTA
TGTAGGACACATGAATGTTGTCTTATTTGCTCCTGAAGATTTACAACTAATTAAAGGAGCACCTTCGATTCGACGAAAAT
TCATCGATATGGAACTTGGGCAAATTAAGCCAATCTACTTATCTGACTTAACCAATTATAACCACATCCTAAAGCAAAGA
AACACTTACCTAAAATCAGATCAAAAAATAGATGAAACATTCCTTTCTGTGTTAGATGATCAGCTAGTTGATTATGGATG
TCGTGTAATGAATCACCGCTTAGATTTCATAAAAAAACTAGAATCATTTGGGCGTAAGAAACATTTTGAACTCTCTAATC
AGATCGAAGAGTTGTCAATATCCTATCAATCTTCTGTCAATATAACTGACAAACAAAACTTATCCGAATCTTTCAAAATT
GCTTTAGAAAAAAGTAAATCCAGAGATTTATTTAAAAAGAATACTGGTGTCGGTCCTCATCGAGATGACATTTCTTTTTA
TATAAATGGGATGGATGCTAGTTTCGGAAGCCAAGGTCAACATCGTAGTCTCGTCCTCTCGATAAAATTAGCAGAAATCG
AATTAATGGAAAGCATTACCACAGAATCTCCTATATTACTGCTTGACGATGTGATGAGTGAACTTGACAACACTAGACAA
TTAAAATTATTAGAAACGATTTCTCAATCAATCCAAACCTTTATCACAACAACAAGCTTAGACCATCTTCAAAATCTACC
AGAAAATCTAAGTATCTTCACTATTCAGGATGGTAAAGCTGCTGTAAATGGAAATTGA

Domains

Predicted by InterProScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (3-358)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Streptococcus pneumoniae R6	99.178	100	0.992
recF	Bacillus subtilis subsp. subtilis str. 168	45.628	100	0.458