Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | CSB78_RS10615 | Genome accession | NZ_CP029671 |
| Coordinates | 2078879..2079274 (+) | Length | 131 a.a. |
| NCBI ID | WP_000932694.1 | Uniprot ID | - |
| Organism | Staphylococcus aureus strain AR_0222 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 2073879..2084274
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CSB78_RS10585 (CSB78_1906) | - | 2075137..2075541 (+) | 405 | WP_001094394.1 | F0F1 ATP synthase subunit epsilon | - |
| CSB78_RS10590 | - | 2075879..2075971 (+) | 93 | WP_001790611.1 | hypothetical protein | - |
| CSB78_RS10595 (CSB78_1907) | - | 2076103..2076336 (+) | 234 | WP_000384523.1 | DUF1146 family protein | - |
| CSB78_RS10600 (CSB78_1908) | murA | 2076447..2077712 (+) | 1266 | WP_000358006.1 | UDP-N-acetylglucosamine 1-carboxyvinyltransferase | - |
| CSB78_RS10605 (CSB78_1909) | fabZ | 2077746..2078186 (+) | 441 | WP_000447678.1 | 3-hydroxyacyl-ACP dehydratase FabZ | - |
| CSB78_RS10610 (CSB78_1910) | - | 2078245..2078685 (-) | 441 | WP_000846746.1 | YwpF-like family protein | - |
| CSB78_RS10615 (CSB78_1911) | ssb | 2078879..2079274 (+) | 396 | WP_000932694.1 | single-stranded DNA-binding protein | Machinery gene |
| CSB78_RS10620 (CSB78_1912) | sceD | 2079663..2080358 (+) | 696 | WP_000752005.1 | lytic transglycosylase SceD | - |
| CSB78_RS10625 (CSB78_1914) | tenA | 2080745..2081434 (+) | 690 | WP_000396077.1 | thiaminase II | - |
| CSB78_RS10630 (CSB78_1915) | thiD | 2081427..2082257 (+) | 831 | WP_000594954.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| CSB78_RS10635 (CSB78_1916) | thiM | 2082241..2083032 (+) | 792 | WP_001108483.1 | hydroxyethylthiazole kinase | - |
| CSB78_RS10640 (CSB78_1917) | thiE | 2083034..2083675 (+) | 642 | WP_000483153.1 | thiamine phosphate synthase | - |
Sequence
Protein
Download Length: 131 a.a. Molecular weight: 15042.09 Da Isoelectric Point: 5.6824
>NTDB_id=294968 CSB78_RS10615 WP_000932694.1 2078879..2079274(+) (ssb) [Staphylococcus aureus strain AR_0222]
MLNKIVIVGRLTKDAQIFEKEDRKIATFCVATHRNYKDENGEIVCDYLFCKAFGKLASNIEKYTNQGTLVGITGQMRSRK
YDKDGQTHFVTELYVETIKFMSPKSQNNEILSDSILDIDSQNIDNHDLLEI
MLNKIVIVGRLTKDAQIFEKEDRKIATFCVATHRNYKDENGEIVCDYLFCKAFGKLASNIEKYTNQGTLVGITGQMRSRK
YDKDGQTHFVTELYVETIKFMSPKSQNNEILSDSILDIDSQNIDNHDLLEI
Nucleotide
Download Length: 396 bp
>NTDB_id=294968 CSB78_RS10615 WP_000932694.1 2078879..2079274(+) (ssb) [Staphylococcus aureus strain AR_0222]
ATGCTAAATAAAATCGTAATTGTCGGGAGACTGACGAAAGACGCACAAATATTTGAAAAGGAGGATAGAAAAATTGCAAC
GTTTTGTGTTGCAACGCACCGAAATTATAAAGATGAAAATGGAGAAATCGTCTGTGATTACTTATTCTGTAAAGCATTTG
GCAAGTTAGCTTCTAATATAGAAAAATATACTAATCAAGGTACATTGGTTGGTATAACTGGTCAAATGAGATCAAGAAAG
TATGATAAAGACGGACAAACACACTTTGTCACTGAATTATATGTTGAAACAATAAAATTTATGTCCCCTAAATCCCAAAA
TAATGAAATTCTCTCAGATAGTATTTTAGATATTGACTCTCAAAATATAGATAATCATGACTTATTAGAAATTTAA
ATGCTAAATAAAATCGTAATTGTCGGGAGACTGACGAAAGACGCACAAATATTTGAAAAGGAGGATAGAAAAATTGCAAC
GTTTTGTGTTGCAACGCACCGAAATTATAAAGATGAAAATGGAGAAATCGTCTGTGATTACTTATTCTGTAAAGCATTTG
GCAAGTTAGCTTCTAATATAGAAAAATATACTAATCAAGGTACATTGGTTGGTATAACTGGTCAAATGAGATCAAGAAAG
TATGATAAAGACGGACAAACACACTTTGTCACTGAATTATATGTTGAAACAATAAAATTTATGTCCCCTAAATCCCAAAA
TAATGAAATTCTCTCAGATAGTATTTTAGATATTGACTCTCAAAATATAGATAATCATGACTTATTAGAAATTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Staphylococcus aureus N315 |
100 |
100 |
1 |
| ssb | Staphylococcus aureus MW2 |
99.237 |
100 |
0.992 |