Detailed information NTG0294870

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: EQH46_RS10725
• Genome accession: NZ_CP035234
• Coordinates: 2092307..2093404 (+)
• Length: 365 a.a.
• NCBI ID: WP_000266666.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain TVO_1902277
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2087307..2098404

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EQH46_RS10700 (EQH46_11225)	pgsA	2087828..2088373 (-)	546	WP_000712132.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-
EQH46_RS10705 (EQH46_11230)	rodZ	2088384..2089205 (-)	822	WP_238134141.1	cytoskeleton protein RodZ	-
EQH46_RS10710 (EQH46_11235)	yfmH	2089247..2090530 (-)	1284	WP_000170217.1	EF-P 5-aminopentanol modification-associated protein YfmH	-
EQH46_RS10715 (EQH46_11240)	yfmF	2090527..2091777 (-)	1251	WP_000424271.1	EF-P 5-aminopentanol modification-associated protein YfmF	-
EQH46_RS10720 (EQH46_11245)	yaaA	2091936..2092304 (+)	369	WP_000455903.1	S4 domain-containing protein YaaA	-
EQH46_RS10725 (EQH46_11250)	recF	2092307..2093404 (+)	1098	WP_000266666.1	DNA replication/repair protein RecF	Machinery gene
EQH46_RS10730 (EQH46_11255)	guaB	2093455..2094933 (-)	1479	WP_000073424.1	IMP dehydrogenase	-
EQH46_RS10735 (EQH46_11260)	trpS	2095085..2096110 (-)	1026	WP_000165444.1	tryptophan--tRNA ligase	-
EQH46_RS10740 (EQH46_11265)	-	2096316..2097938 (+)	1623	WP_000958770.1	ATP-binding cassette domain-containing protein	-

Sequence

Protein

• Length: 365 a.a.
• Molecular weight: 41915.99 Da
• Isoelectric Point: 8.6711

>NTDB_id=294870 EQH46_RS10725 WP_000266666.1 2092307..2093404(+) (recF) [Streptococcus pneumoniae strain TVO_1902277]
MWLQHLSLKTFRNYKETKIDFNPKLNVFLGRNAQGKTNMLEAIYFLALTRSHRTRTDKNLIHFDEEQLHLSGLVQKKTGS
IPLEIELTQKGRVTKVNHLKQARLSDYVGHMNVVLFAPEDLQLIKGAPSIRRKFIDMELGQIKPIYLSDLTNYNHILKQR
NTYLKSDQKIDETFLSVLDDQLVDYGCRVMNHRLDFIKKLESFGRKKHFELSNQIEELSISYQSSVNITDKQNLSESFKI
ALEKSKSRDLFKKNTGVGPHRDDISFYINGMDASFGSQGQHRSLVLSIKLAEIELMESITTESPILLLDDVMSELDNTRQ
LKLLETISQSIQTFITTTSLDHLQNLPENLSIFTIQDGKAAVNGN

Nucleotide

• Length: 1098 bp

>NTDB_id=294870 EQH46_RS10725 WP_000266666.1 2092307..2093404(+) (recF) [Streptococcus pneumoniae strain TVO_1902277]
ATGTGGCTACAACATCTATCTCTCAAGACTTTTCGTAATTACAAAGAAACGAAAATAGACTTTAATCCTAAATTGAATGT
CTTTTTGGGACGTAATGCACAAGGAAAAACAAACATGTTAGAGGCTATCTATTTTTTAGCCTTAACGCGTAGTCATCGAA
CTCGAACAGATAAAAATCTCATTCATTTTGATGAGGAACAACTTCATCTTTCAGGTCTCGTTCAGAAAAAAACTGGATCC
ATTCCCCTAGAAATCGAACTAACACAAAAAGGCCGTGTAACAAAAGTTAATCACTTAAAACAGGCACGCCTTTCAGATTA
TGTAGGACACATGAATGTTGTCTTATTTGCTCCTGAAGATTTACAACTAATTAAAGGAGCACCTTCGATTCGACGAAAAT
TCATCGATATGGAACTTGGGCAAATTAAGCCAATCTACTTATCTGACTTAACCAATTATAACCACATCCTAAAGCAAAGA
AACACTTACCTAAAATCAGATCAAAAAATAGATGAAACATTCCTTTCTGTGTTAGATGATCAGCTAGTTGATTATGGATG
TCGTGTAATGAATCACCGCTTAGATTTCATAAAAAAACTAGAATCATTTGGGCGTAAGAAACATTTTGAACTCTCTAATC
AGATCGAAGAGTTGTCAATATCCTATCAATCTTCTGTCAATATAACTGACAAACAAAACTTATCCGAATCTTTCAAAATT
GCTTTAGAAAAAAGTAAATCCAGAGATTTATTTAAAAAGAATACTGGTGTCGGTCCTCATCGAGATGACATTTCTTTTTA
TATAAATGGGATGGATGCTAGTTTCGGAAGCCAAGGTCAACATCGTAGTCTCGTCCTCTCGATAAAATTAGCAGAAATCG
AATTAATGGAAAGCATTACCACAGAATCTCCTATATTACTGCTTGACGATGTGATGAGTGAACTTGACAACACTAGACAA
TTAAAATTATTAGAAACGATTTCTCAATCAATCCAAACCTTTATCACAACAACAAGCTTAGACCATCTTCAAAATCTACC
AGAAAATCTAAGTATCTTCACTATTCAGGATGGTAAAGCTGCTGTAAATGGAAATTGA

Domains

Predicted by InterProScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (3-358)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Streptococcus pneumoniae R6	99.178	100	0.992
recF	Bacillus subtilis subsp. subtilis str. 168	45.628	100	0.458