Detailed information
Bioinformatically predicted
Overview
| Name | pilV | Type | Machinery gene |
| Locus tag | CSC33_RS18825 | Genome accession | NZ_CP029660 |
| Coordinates | 3932941..3933498 (+) | Length | 185 a.a. |
| NCBI ID | WP_003125211.1 | Uniprot ID | A0A6A9K9C7 |
| Organism | Pseudomonas aeruginosa strain AR_0446 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3927941..3938498
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CSC33_RS18805 (CSC33_3813) | pilR | 3929217..3930554 (+) | 1338 | WP_003094694.1 | two-component system response regulator PilR | Regulator |
| CSC33_RS18810 (CSC33_3814) | thiO | 3930600..3931694 (-) | 1095 | WP_110194839.1 | glycine oxidase ThiO | - |
| CSC33_RS18815 | - | 3931829..3932338 (+) | 510 | WP_110194330.1 | Tfp pilus assembly protein FimT/FimU | - |
| CSC33_RS18820 (CSC33_3815) | - | 3932444..3932950 (+) | 507 | WP_003134935.1 | Tfp pilus assembly protein FimT/FimU | - |
| CSC33_RS18825 (CSC33_3816) | pilV | 3932941..3933498 (+) | 558 | WP_003125211.1 | type 4a pilus minor pilin PilV | Machinery gene |
| CSC33_RS18830 (CSC33_3817) | pilW | 3933495..3934319 (+) | 825 | WP_073649714.1 | type 4a pilus minor pilin PilW | - |
| CSC33_RS18835 (CSC33_3818) | pilX | 3934316..3934903 (+) | 588 | WP_033972921.1 | type 4a pilus minor pilin PilX | - |
| CSC33_RS18840 (CSC33_3819) | pilY1 | 3934915..3938400 (+) | 3486 | WP_110194331.1 | type 4a pilus biogenesis protein PilY1 | - |
Sequence
Protein
Download Length: 185 a.a. Molecular weight: 20087.19 Da Isoelectric Point: 8.2171
>NTDB_id=294763 CSC33_RS18825 WP_003125211.1 3932941..3933498(+) (pilV) [Pseudomonas aeruginosa strain AR_0446]
MLLKSRHRSLYQSGFSMIEVLVALLLISIGVLGMIAMQGKTIQYTADSVERNKAAMLGSNLLESMRASPKALYDVKDQMA
TQSDFFKAKGSAFPTAPSSCTPLPDAIKDRLGCWAEQVKNELPGAGDLLKSDYYICRSSKPGDCDGKGSMLEIRLAWRGK
QGACVNAADSSADTSLCYYTLRVEP
MLLKSRHRSLYQSGFSMIEVLVALLLISIGVLGMIAMQGKTIQYTADSVERNKAAMLGSNLLESMRASPKALYDVKDQMA
TQSDFFKAKGSAFPTAPSSCTPLPDAIKDRLGCWAEQVKNELPGAGDLLKSDYYICRSSKPGDCDGKGSMLEIRLAWRGK
QGACVNAADSSADTSLCYYTLRVEP
Nucleotide
Download Length: 558 bp
>NTDB_id=294763 CSC33_RS18825 WP_003125211.1 3932941..3933498(+) (pilV) [Pseudomonas aeruginosa strain AR_0446]
ATGCTATTGAAATCGCGACACAGGTCGCTGTACCAATCCGGCTTCAGCATGATCGAAGTGCTGGTCGCCCTGCTGCTGAT
CAGCATCGGCGTGCTGGGCATGATCGCCATGCAGGGCAAGACCATCCAGTACACCGCCGACTCGGTCGAGCGCAACAAGG
CAGCCATGCTCGGCAGCAACCTGCTGGAAAGCATGCGGGCGAGCCCGAAGGCGCTGTACGACGTCAAGGACCAGATGGCC
ACGCAATCCGACTTCTTCAAGGCCAAGGGGTCGGCGTTCCCCACCGCGCCGTCCTCCTGTACGCCATTGCCCGACGCGAT
CAAGGACCGCCTGGGATGCTGGGCGGAACAGGTGAAGAACGAACTGCCAGGCGCTGGCGACCTGCTGAAGAGCGACTACT
ACATCTGCCGCAGCTCGAAGCCGGGCGACTGCGACGGCAAGGGCTCCATGCTGGAAATCCGCCTGGCCTGGCGCGGCAAG
CAAGGCGCCTGCGTCAACGCCGCCGACAGCAGCGCCGATACCTCCCTCTGCTACTACACCCTCAGGGTCGAGCCATGA
ATGCTATTGAAATCGCGACACAGGTCGCTGTACCAATCCGGCTTCAGCATGATCGAAGTGCTGGTCGCCCTGCTGCTGAT
CAGCATCGGCGTGCTGGGCATGATCGCCATGCAGGGCAAGACCATCCAGTACACCGCCGACTCGGTCGAGCGCAACAAGG
CAGCCATGCTCGGCAGCAACCTGCTGGAAAGCATGCGGGCGAGCCCGAAGGCGCTGTACGACGTCAAGGACCAGATGGCC
ACGCAATCCGACTTCTTCAAGGCCAAGGGGTCGGCGTTCCCCACCGCGCCGTCCTCCTGTACGCCATTGCCCGACGCGAT
CAAGGACCGCCTGGGATGCTGGGCGGAACAGGTGAAGAACGAACTGCCAGGCGCTGGCGACCTGCTGAAGAGCGACTACT
ACATCTGCCGCAGCTCGAAGCCGGGCGACTGCGACGGCAAGGGCTCCATGCTGGAAATCCGCCTGGCCTGGCGCGGCAAG
CAAGGCGCCTGCGTCAACGCCGCCGACAGCAGCGCCGATACCTCCCTCTGCTACTACACCCTCAGGGTCGAGCCATGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilV | Pseudomonas aeruginosa PAK |
98.919 |
100 |
0.989 |