Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   EQZ01_RS21280 Genome accession   NZ_CP035231
Coordinates   4071446..4072240 (-) Length   264 a.a.
NCBI ID   WP_003226939.1    Uniprot ID   A0ABU0V6L5
Organism   Bacillus subtilis strain SRCM103571     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 4066446..4077240
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EQZ01_RS21255 (EQZ01_21255) - 4067566..4068249 (-) 684 WP_024573086.1 response regulator transcription factor -
  EQZ01_RS21260 (EQZ01_21260) - 4068461..4069360 (+) 900 WP_128738533.1 PepSY domain-containing protein -
  EQZ01_RS21265 (EQZ01_21265) - 4069521..4070021 (+) 501 WP_128738535.1 PepSY domain-containing protein -
  EQZ01_RS21270 (EQZ01_21270) - 4070025..4070142 (-) 118 Protein_4121 hypothetical protein -
  EQZ01_RS21275 (EQZ01_21275) htrA 4070162..4071364 (-) 1203 WP_015250812.1 serine protease HtrC Regulator
  EQZ01_RS21280 (EQZ01_21280) vicX 4071446..4072240 (-) 795 WP_003226939.1 MBL fold metallo-hydrolase Regulator
  EQZ01_RS21285 (EQZ01_21285) walI 4072262..4073104 (-) 843 WP_029318542.1 WalRK two-component regulatory system regulator WalI -
  EQZ01_RS21290 (EQZ01_21290) walH 4073091..4074458 (-) 1368 WP_128738537.1 WalRK two-component regulatory system regulator WalH -
  EQZ01_RS21295 (EQZ01_21295) walK 4074448..4076283 (-) 1836 WP_009968432.1 cell wall metabolism sensor histidine kinase WalK -
  EQZ01_RS21300 (EQZ01_21300) walR 4076291..4076998 (-) 708 WP_003244363.1 cell wall metabolism DNA-binding response regulator WalR -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 29283.28 Da        Isoelectric Point: 5.8036

>NTDB_id=294755 EQZ01_RS21280 WP_003226939.1 4071446..4072240(-) (vicX) [Bacillus subtilis strain SRCM103571]
MSLQFSVLASGSTGNAFYLETEDHAFLVDAGLSGKAMDGLMAQIGRKLDDVDGIFVTHEHSDHIKGLGVVARKYKLPIYA
NEKTWKAMENQIGKIDTDQKFVFPMETVKSFGGLDVESFGVSHDAAEPMFYVFHYNGRKLALMTDTGYVSDRMKGIIRSA
NVFVFESNHDVGMLQMGRYPWSIKRRILSDVGHVSNEDAALAMTDVIGDETSRIYLAHLSQDNNMKELARMSVQQTLASK
GFVTGETFDLYDTDPKKATPLCAV

Nucleotide


Download         Length: 795 bp        

>NTDB_id=294755 EQZ01_RS21280 WP_003226939.1 4071446..4072240(-) (vicX) [Bacillus subtilis strain SRCM103571]
ATGAGCTTGCAATTTAGCGTACTTGCGAGCGGGAGTACGGGAAATGCGTTTTACCTCGAAACAGAGGATCACGCATTTTT
AGTGGACGCCGGTTTGAGCGGGAAAGCCATGGATGGGCTGATGGCGCAGATCGGGCGTAAGCTGGATGATGTAGACGGCA
TTTTTGTGACGCATGAGCATAGTGACCATATTAAGGGCCTTGGTGTCGTCGCCAGAAAGTACAAGCTTCCGATCTATGCG
AACGAGAAGACTTGGAAAGCGATGGAGAATCAAATCGGCAAAATTGACACCGATCAGAAGTTTGTATTTCCGATGGAGAC
GGTAAAGTCGTTCGGCGGACTTGATGTTGAATCGTTTGGCGTCTCCCACGATGCGGCGGAACCGATGTTTTATGTGTTCC
ATTATAACGGCCGAAAGCTCGCATTAATGACAGATACGGGATATGTCAGCGACCGAATGAAAGGCATTATCCGTTCAGCG
AATGTGTTTGTGTTTGAAAGCAATCACGATGTCGGTATGCTGCAAATGGGAAGATACCCATGGAGCATTAAGCGGCGGAT
TTTAAGTGACGTCGGGCACGTGTCAAATGAAGATGCTGCCTTGGCGATGACGGATGTCATTGGCGATGAGACGTCTCGTA
TTTACCTGGCGCATTTGAGCCAGGACAACAACATGAAGGAGCTGGCAAGAATGTCTGTGCAGCAGACATTGGCTTCTAAA
GGATTTGTGACGGGTGAGACATTTGACTTATACGACACTGATCCGAAGAAGGCCACTCCGCTTTGCGCTGTATAA

Domains

Predicted by InterProScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(12-218)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

53.435

99.242

0.53