Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | CSC52_RS04385 | Genome accession | NZ_CP029658 |
| Coordinates | 830730..831125 (+) | Length | 131 a.a. |
| NCBI ID | WP_000932694.1 | Uniprot ID | - |
| Organism | Staphylococcus aureus strain AR_0467 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 825730..836125
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CSC52_RS04355 (CSC52_0815) | - | 826988..827392 (+) | 405 | WP_001094394.1 | F0F1 ATP synthase subunit epsilon | - |
| CSC52_RS04360 | - | 827730..827822 (+) | 93 | WP_001790611.1 | hypothetical protein | - |
| CSC52_RS04365 (CSC52_0816) | - | 827954..828187 (+) | 234 | WP_000384523.1 | DUF1146 family protein | - |
| CSC52_RS04370 (CSC52_0817) | murA | 828298..829563 (+) | 1266 | WP_000358006.1 | UDP-N-acetylglucosamine 1-carboxyvinyltransferase | - |
| CSC52_RS04375 (CSC52_0818) | fabZ | 829597..830037 (+) | 441 | WP_000447678.1 | 3-hydroxyacyl-ACP dehydratase FabZ | - |
| CSC52_RS04380 (CSC52_0819) | - | 830096..830536 (-) | 441 | WP_000846746.1 | YwpF-like family protein | - |
| CSC52_RS04385 (CSC52_0820) | ssb | 830730..831125 (+) | 396 | WP_000932694.1 | single-stranded DNA-binding protein | Machinery gene |
| CSC52_RS04390 (CSC52_0821) | sceD | 831514..832209 (+) | 696 | WP_000752005.1 | lytic transglycosylase SceD | - |
| CSC52_RS04395 (CSC52_0823) | tenA | 832596..833285 (+) | 690 | WP_000396077.1 | thiaminase II | - |
| CSC52_RS04400 (CSC52_0824) | thiD | 833278..834108 (+) | 831 | WP_000594954.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| CSC52_RS04405 (CSC52_0825) | thiM | 834092..834883 (+) | 792 | WP_001108483.1 | hydroxyethylthiazole kinase | - |
| CSC52_RS04410 (CSC52_0826) | thiE | 834885..835526 (+) | 642 | WP_000483153.1 | thiamine phosphate synthase | - |
Sequence
Protein
Download Length: 131 a.a. Molecular weight: 15042.09 Da Isoelectric Point: 5.6824
>NTDB_id=294708 CSC52_RS04385 WP_000932694.1 830730..831125(+) (ssb) [Staphylococcus aureus strain AR_0467]
MLNKIVIVGRLTKDAQIFEKEDRKIATFCVATHRNYKDENGEIVCDYLFCKAFGKLASNIEKYTNQGTLVGITGQMRSRK
YDKDGQTHFVTELYVETIKFMSPKSQNNEILSDSILDIDSQNIDNHDLLEI
MLNKIVIVGRLTKDAQIFEKEDRKIATFCVATHRNYKDENGEIVCDYLFCKAFGKLASNIEKYTNQGTLVGITGQMRSRK
YDKDGQTHFVTELYVETIKFMSPKSQNNEILSDSILDIDSQNIDNHDLLEI
Nucleotide
Download Length: 396 bp
>NTDB_id=294708 CSC52_RS04385 WP_000932694.1 830730..831125(+) (ssb) [Staphylococcus aureus strain AR_0467]
ATGCTAAATAAAATCGTAATTGTCGGGAGACTGACGAAAGACGCACAAATATTTGAAAAGGAGGATAGAAAAATTGCAAC
GTTTTGTGTTGCAACGCACCGAAATTATAAAGATGAAAATGGAGAAATCGTCTGTGATTACTTATTCTGTAAAGCATTTG
GCAAGTTAGCTTCTAATATAGAAAAATATACTAATCAAGGTACATTGGTTGGTATAACTGGTCAAATGAGATCAAGAAAG
TATGATAAAGACGGACAAACACACTTTGTCACTGAATTATATGTTGAAACAATAAAATTTATGTCCCCTAAATCCCAAAA
TAATGAAATTCTCTCAGATAGTATTTTAGATATTGACTCTCAAAATATAGATAATCATGACTTATTAGAAATTTAA
ATGCTAAATAAAATCGTAATTGTCGGGAGACTGACGAAAGACGCACAAATATTTGAAAAGGAGGATAGAAAAATTGCAAC
GTTTTGTGTTGCAACGCACCGAAATTATAAAGATGAAAATGGAGAAATCGTCTGTGATTACTTATTCTGTAAAGCATTTG
GCAAGTTAGCTTCTAATATAGAAAAATATACTAATCAAGGTACATTGGTTGGTATAACTGGTCAAATGAGATCAAGAAAG
TATGATAAAGACGGACAAACACACTTTGTCACTGAATTATATGTTGAAACAATAAAATTTATGTCCCCTAAATCCCAAAA
TAATGAAATTCTCTCAGATAGTATTTTAGATATTGACTCTCAAAATATAGATAATCATGACTTATTAGAAATTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Staphylococcus aureus N315 |
100 |
100 |
1 |
| ssb | Staphylococcus aureus MW2 |
99.237 |
100 |
0.992 |