Detailed information    

insolico Bioinformatically predicted

Overview

Name   hexB   Type   Machinery gene
Locus tag   EQZ01_RS09635 Genome accession   NZ_CP035231
Coordinates   1816544..1818427 (+) Length   627 a.a.
NCBI ID   WP_029317806.1    Uniprot ID   -
Organism   Bacillus subtilis strain SRCM103571     
Function   DNA mismatch repair (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1811544..1823427
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EQZ01_RS09620 (EQZ01_09620) ymcA 1812589..1813020 (+) 432 WP_003231834.1 regulatory iron-sulfur-containing complex subunit RicA Regulator
  EQZ01_RS09625 (EQZ01_09625) cotE 1813274..1813819 (+) 546 WP_003231833.1 outer spore coat protein CotE -
  EQZ01_RS09630 (EQZ01_09630) hexA 1813952..1816528 (+) 2577 WP_128737864.1 DNA mismatch repair protein MutS Machinery gene
  EQZ01_RS09635 (EQZ01_09635) hexB 1816544..1818427 (+) 1884 WP_029317806.1 DNA mismatch repair endonuclease MutL Machinery gene
  EQZ01_RS09640 (EQZ01_09640) ymzD 1818826..1819281 (-) 456 WP_015252068.1 regulatory YrvL family protein -
  EQZ01_RS09645 (EQZ01_09645) - 1819437..1819994 (-) 558 WP_038428985.1 hypothetical protein -
  EQZ01_RS09650 (EQZ01_09650) pksA 1820114..1820731 (+) 618 WP_124073228.1 TetR/AcrR family transcriptional regulator -
  EQZ01_RS09655 (EQZ01_09655) pksB 1820921..1821598 (+) 678 WP_003231824.1 MBL fold metallo-hydrolase -
  EQZ01_RS09660 (EQZ01_09660) - 1821708..1821973 (+) 266 Protein_1847 hypothetical protein -
  EQZ01_RS09665 (EQZ01_09665) fabD 1821970..1822836 (+) 867 WP_080529333.1 ACP S-malonyltransferase -

Sequence

Protein


Download         Length: 627 a.a.        Molecular weight: 70458.40 Da        Isoelectric Point: 5.7662

>NTDB_id=294685 EQZ01_RS09635 WP_029317806.1 1816544..1818427(+) (hexB) [Bacillus subtilis strain SRCM103571]
MAKVIQLSDELSNKIAAGEVVERPASVVKELVENAIDADSTVIEIDIEEAGLASIRVLDNGEGMENEDCKRAFRRHATSK
IKDENDLFRVRTLGFRGEALPSIASVSHLEITTSTGEGAGTKLVLQGGNIISESRSSSRKGTEIVVSNLFFNTPARLKYM
KTVHTELGNITDVVNRIALAHPEVSIRLRHHGKNLLQTNGNGDVRHVLAAIYGTAVAKKMLPLHVSSLDFEVKGYIALPE
ITRASRNYMSSVVNGRYIKNFPLVKAVHEGYHTLLPIGRHPITFIEITMDPILVDVNVHPSKLEVRLSKETELHDLIRDG
IKDVFKHQQLIPSAQLPKKSAPVIKNEQQFITFDEKPPEKKVPEKSTASSYSPMKLSSVVKEPVDAEEELPPLQFDAPPI
VDQEQTIEVSDVSAEQPETFELECHEEQPQPASERVPIMYPIGQMHGTYILAQNENGLYIIDQHAAQERIKYEYFREKVG
EVEPEVQDMIVPLTFHYSTNEALIIEQHKQELESVGVFLESFGSNSYIVRCHPAWFPKGEEAELIEEIIQQVLDSKNIDI
KKLREEAAIMMSCKGSIKANRHLRNDEIKALLDDLRSTSDPFTCPHGRPIIIHHSTYEMEKMFKRVM

Nucleotide


Download         Length: 1884 bp        

>NTDB_id=294685 EQZ01_RS09635 WP_029317806.1 1816544..1818427(+) (hexB) [Bacillus subtilis strain SRCM103571]
GTGGCAAAAGTCATCCAGCTGTCAGATGAGCTTTCAAATAAAATAGCGGCGGGCGAGGTTGTGGAACGGCCCGCCTCAGT
CGTCAAAGAATTGGTGGAAAATGCGATCGACGCTGACAGCACAGTCATTGAAATCGATATTGAGGAAGCAGGCCTTGCAT
CCATTCGGGTCTTGGATAACGGCGAAGGAATGGAGAATGAAGATTGTAAGCGTGCTTTCCGCCGCCACGCAACGAGTAAA
ATAAAAGATGAAAATGATTTATTCAGGGTGAGAACGCTCGGTTTCAGGGGAGAAGCCCTGCCGAGTATCGCGTCAGTCTC
TCATCTGGAGATTACAACAAGCACTGGTGAAGGAGCTGGGACGAAGCTCGTCCTCCAAGGAGGAAACATCATTTCCGAAT
CGCGTTCCTCAAGCAGGAAGGGAACTGAAATTGTCGTTTCCAACCTGTTTTTTAACACACCGGCCCGTTTGAAATATATG
AAAACCGTTCATACAGAGCTTGGAAACATTACGGATGTGGTTAACCGTATTGCTCTGGCGCATCCAGAGGTATCGATCCG
CCTGCGCCATCATGGGAAAAACCTGCTTCAAACGAACGGAAACGGAGATGTGCGCCATGTACTGGCAGCGATTTACGGCA
CGGCTGTCGCCAAAAAAATGCTTCCGCTGCATGTGAGCTCCTTGGATTTTGAAGTAAAGGGATATATCGCCCTCCCAGAG
ATTACACGGGCGTCGAGGAACTATATGTCGTCTGTGGTCAATGGCCGTTACATTAAAAATTTCCCGCTCGTCAAAGCGGT
TCATGAAGGCTATCATACGCTTCTGCCGATCGGACGCCATCCGATTACTTTTATAGAAATTACGATGGACCCGATTTTAG
TCGATGTTAACGTGCATCCATCGAAGCTTGAGGTCCGGCTCAGCAAGGAAACAGAGCTTCATGACTTAATTCGCGATGGA
ATTAAAGATGTATTTAAACACCAGCAGCTGATTCCGAGTGCCCAGCTCCCGAAAAAATCGGCACCTGTAATCAAAAATGA
GCAGCAGTTCATAACCTTTGATGAAAAGCCTCCGGAAAAAAAAGTTCCGGAAAAATCGACTGCGTCATCTTATTCACCAA
TGAAGCTCAGCTCAGTCGTGAAAGAGCCGGTTGATGCGGAGGAAGAATTGCCACCTCTCCAATTTGATGCTCCTCCTATC
GTTGATCAGGAACAAACCATTGAGGTGTCCGATGTTTCAGCAGAACAGCCTGAAACATTTGAGCTGGAATGCCATGAGGA
ACAGCCGCAGCCAGCGTCTGAGCGGGTTCCGATTATGTACCCGATCGGCCAGATGCACGGGACTTATATATTGGCACAAA
ACGAAAACGGCTTGTATATTATTGACCAGCACGCCGCCCAAGAACGTATTAAATATGAGTACTTCCGTGAAAAGGTGGGG
GAGGTTGAGCCTGAGGTGCAGGATATGATTGTACCGCTGACATTCCACTACTCCACAAATGAGGCTTTGATTATTGAACA
GCACAAACAAGAGCTCGAAAGCGTCGGTGTCTTTTTAGAGTCATTCGGCTCTAACAGCTACATCGTCCGCTGCCACCCGG
CCTGGTTTCCAAAGGGAGAAGAAGCAGAGCTCATAGAAGAAATCATTCAGCAGGTGCTCGACTCCAAAAATATAGATATT
AAAAAACTCCGCGAGGAAGCGGCGATTATGATGAGCTGCAAAGGCTCCATCAAAGCAAATCGCCACCTCAGAAACGACGA
AATCAAAGCGCTTCTGGACGACCTCCGAAGCACATCAGACCCATTTACATGCCCGCACGGCCGCCCGATCATCATACACC
ATTCCACTTATGAGATGGAAAAGATGTTCAAACGCGTGATGTAG

Domains

Predicted by InterProScan.

DNA mismatch repair protein, C-terminal domain (DNA_mis_repair)

(209-324)

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c_3)

(25-124)

MutL C terminal dimerisation domain (MutL_C)

(442-583)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  hexB Streptococcus pneumoniae R6

45.497

100

0.467