Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | CSC54_RS06510 | Genome accession | NZ_CP029655 |
| Coordinates | 1250079..1250474 (+) | Length | 131 a.a. |
| NCBI ID | WP_000932694.1 | Uniprot ID | - |
| Organism | Staphylococcus aureus strain AR_0469 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 1245079..1255474
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CSC54_RS06480 (CSC54_1155) | - | 1246338..1246742 (+) | 405 | WP_001094394.1 | F0F1 ATP synthase subunit epsilon | - |
| CSC54_RS06485 | - | 1247080..1247172 (+) | 93 | WP_001790611.1 | hypothetical protein | - |
| CSC54_RS06490 (CSC54_1156) | - | 1247304..1247537 (+) | 234 | WP_000384523.1 | DUF1146 family protein | - |
| CSC54_RS06495 (CSC54_1157) | murA | 1247648..1248913 (+) | 1266 | WP_000358006.1 | UDP-N-acetylglucosamine 1-carboxyvinyltransferase | - |
| CSC54_RS06500 (CSC54_1158) | fabZ | 1248947..1249387 (+) | 441 | WP_000447678.1 | 3-hydroxyacyl-ACP dehydratase FabZ | - |
| CSC54_RS06505 (CSC54_1159) | - | 1249445..1249885 (-) | 441 | WP_000846746.1 | YwpF-like family protein | - |
| CSC54_RS06510 (CSC54_1160) | ssb | 1250079..1250474 (+) | 396 | WP_000932694.1 | single-stranded DNA-binding protein | Machinery gene |
| CSC54_RS06515 (CSC54_1161) | sceD | 1250863..1251558 (+) | 696 | WP_000752005.1 | lytic transglycosylase SceD | - |
| CSC54_RS06520 (CSC54_1163) | tenA | 1251945..1252634 (+) | 690 | WP_000396077.1 | thiaminase II | - |
| CSC54_RS06525 (CSC54_1164) | thiD | 1252627..1253457 (+) | 831 | WP_000594954.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| CSC54_RS06530 (CSC54_1165) | thiM | 1253441..1254232 (+) | 792 | WP_001108483.1 | hydroxyethylthiazole kinase | - |
| CSC54_RS06535 (CSC54_1166) | thiE | 1254234..1254875 (+) | 642 | WP_000483153.1 | thiamine phosphate synthase | - |
Sequence
Protein
Download Length: 131 a.a. Molecular weight: 15042.09 Da Isoelectric Point: 5.6824
>NTDB_id=294623 CSC54_RS06510 WP_000932694.1 1250079..1250474(+) (ssb) [Staphylococcus aureus strain AR_0469]
MLNKIVIVGRLTKDAQIFEKEDRKIATFCVATHRNYKDENGEIVCDYLFCKAFGKLASNIEKYTNQGTLVGITGQMRSRK
YDKDGQTHFVTELYVETIKFMSPKSQNNEILSDSILDIDSQNIDNHDLLEI
MLNKIVIVGRLTKDAQIFEKEDRKIATFCVATHRNYKDENGEIVCDYLFCKAFGKLASNIEKYTNQGTLVGITGQMRSRK
YDKDGQTHFVTELYVETIKFMSPKSQNNEILSDSILDIDSQNIDNHDLLEI
Nucleotide
Download Length: 396 bp
>NTDB_id=294623 CSC54_RS06510 WP_000932694.1 1250079..1250474(+) (ssb) [Staphylococcus aureus strain AR_0469]
ATGCTAAATAAAATCGTAATTGTCGGGAGACTGACGAAAGACGCACAAATATTTGAAAAGGAGGATAGAAAAATTGCAAC
GTTTTGTGTTGCAACGCACCGAAATTATAAAGATGAAAATGGAGAAATCGTCTGTGATTACTTATTCTGTAAAGCATTTG
GCAAGTTAGCTTCTAATATAGAAAAATATACTAATCAAGGTACATTGGTTGGTATAACTGGTCAAATGAGATCAAGAAAG
TATGATAAAGACGGACAAACACACTTTGTCACTGAATTATATGTTGAAACAATAAAATTTATGTCCCCTAAATCCCAAAA
TAATGAAATTCTCTCAGATAGTATTTTAGATATTGACTCTCAAAATATAGATAATCATGACTTATTAGAAATTTAA
ATGCTAAATAAAATCGTAATTGTCGGGAGACTGACGAAAGACGCACAAATATTTGAAAAGGAGGATAGAAAAATTGCAAC
GTTTTGTGTTGCAACGCACCGAAATTATAAAGATGAAAATGGAGAAATCGTCTGTGATTACTTATTCTGTAAAGCATTTG
GCAAGTTAGCTTCTAATATAGAAAAATATACTAATCAAGGTACATTGGTTGGTATAACTGGTCAAATGAGATCAAGAAAG
TATGATAAAGACGGACAAACACACTTTGTCACTGAATTATATGTTGAAACAATAAAATTTATGTCCCCTAAATCCCAAAA
TAATGAAATTCTCTCAGATAGTATTTTAGATATTGACTCTCAAAATATAGATAATCATGACTTATTAGAAATTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Staphylococcus aureus N315 |
100 |
100 |
1 |
| ssb | Staphylococcus aureus MW2 |
99.237 |
100 |
0.992 |