Detailed information    

insolico Bioinformatically predicted

Overview

Name   letA   Type   Regulator
Locus tag   EQY76_RS19385 Genome accession   NZ_CP035230
Coordinates   3643371..3643745 (-) Length   124 a.a.
NCBI ID   WP_003227621.1    Uniprot ID   A0A9W5LLN9
Organism   Bacillus subtilis strain SRCM103551     
Function   regulate competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 3638371..3648745
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EQY76_RS19360 (EQY76_19360) - 3638535..3638696 (-) 162 WP_003227632.1 hypothetical protein -
  EQY76_RS19365 (EQY76_19365) glpX 3638911..3639876 (-) 966 WP_003242962.1 class II fructose-bisphosphatase -
  EQY76_RS19370 (EQY76_19370) murAB 3639907..3641196 (-) 1290 WP_003227628.1 UDP-N-acetylglucosamine 1-carboxyvinyltransferase -
  EQY76_RS19375 (EQY76_19375) fsa 3641575..3642213 (-) 639 WP_003227626.1 fructose-6-phosphate aldolase -
  EQY76_RS19380 (EQY76_19380) fbaA 3642333..3643190 (-) 858 WP_003243339.1 class II fructose-bisphosphate aldolase -
  EQY76_RS19385 (EQY76_19385) letA 3643371..3643745 (-) 375 WP_003227621.1 sporulation initiation phosphotransferase Spo0F Regulator
  EQY76_RS19390 (EQY76_19390) ywjG 3643911..3644432 (+) 522 WP_029318708.1 DUF2529 domain-containing protein -
  EQY76_RS19395 (EQY76_19395) pyrG 3644514..3646121 (-) 1608 WP_003227612.1 glutamine hydrolyzing CTP synthase -
  EQY76_RS19400 (EQY76_19400) rpoE 3646363..3646884 (-) 522 WP_014665742.1 DNA-directed RNA polymerase subunit delta -
  EQY76_RS19405 (EQY76_19405) acdA 3647067..3648206 (-) 1140 WP_046160953.1 acyl-CoA dehydrogenase AcdA -

Sequence

Protein


Download         Length: 124 a.a.        Molecular weight: 14227.68 Da        Isoelectric Point: 4.6400

>NTDB_id=294599 EQY76_RS19385 WP_003227621.1 3643371..3643745(-) (letA) [Bacillus subtilis strain SRCM103551]
MMNEKILIVDDQYGIRILLNEVFNKEGYQTFQAANGLQALDIVTKERPDLVLLDMKIPGMDGIEILKRMKVIDENIRVII
MTAYGELDMIQESKELGALTHFAKPFDIDEIRDAVKKYLPLKSN

Nucleotide


Download         Length: 375 bp        

>NTDB_id=294599 EQY76_RS19385 WP_003227621.1 3643371..3643745(-) (letA) [Bacillus subtilis strain SRCM103551]
ATGATGAATGAAAAAATTTTAATCGTTGATGATCAATACGGCATTCGTATTTTGCTAAATGAAGTGTTCAATAAAGAAGG
CTACCAGACGTTTCAGGCTGCGAACGGCCTGCAGGCGCTTGACATTGTGACAAAAGAACGGCCCGACCTTGTGCTTTTGG
ACATGAAAATTCCCGGCATGGACGGAATCGAAATCTTAAAACGGATGAAGGTCATTGACGAAAACATCCGGGTCATTATC
ATGACGGCATACGGAGAGCTCGACATGATCCAAGAATCGAAGGAATTGGGCGCTCTGACGCACTTTGCCAAGCCGTTTGA
CATCGACGAAATCAGAGACGCCGTCAAAAAATATCTGCCCCTGAAGTCTAACTGA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(6-116)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A9W5LLN9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  letA Legionella pneumophila str. Paris

38.462

94.355

0.363
  letA Legionella pneumophila strain ERS1305867

38.462

94.355

0.363