Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | CSC56_RS12095 | Genome accession | NZ_CP029652 |
| Coordinates | 2337839..2338234 (+) | Length | 131 a.a. |
| NCBI ID | WP_000932694.1 | Uniprot ID | - |
| Organism | Staphylococcus aureus strain AR_0471 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 2332839..2343234
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CSC56_RS12065 (CSC56_2228) | - | 2334065..2334469 (+) | 405 | WP_001094394.1 | F0F1 ATP synthase subunit epsilon | - |
| CSC56_RS12075 (CSC56_2229) | - | 2335066..2335299 (+) | 234 | WP_000384523.1 | DUF1146 family protein | - |
| CSC56_RS12080 (CSC56_2230) | murA | 2335410..2336675 (+) | 1266 | WP_000358005.1 | UDP-N-acetylglucosamine 1-carboxyvinyltransferase | - |
| CSC56_RS12085 (CSC56_2231) | fabZ | 2336709..2337149 (+) | 441 | WP_000447678.1 | 3-hydroxyacyl-ACP dehydratase FabZ | - |
| CSC56_RS12090 (CSC56_2232) | - | 2337205..2337645 (-) | 441 | WP_000846751.1 | YwpF-like family protein | - |
| CSC56_RS12095 (CSC56_2233) | ssb | 2337839..2338234 (+) | 396 | WP_000932694.1 | single-stranded DNA-binding protein | Machinery gene |
| CSC56_RS12100 (CSC56_2234) | sceD | 2338623..2339318 (+) | 696 | WP_000752011.1 | lytic transglycosylase SceD | - |
| CSC56_RS12105 (CSC56_2236) | tenA | 2339706..2340395 (+) | 690 | WP_000396063.1 | thiaminase II | - |
| CSC56_RS12110 (CSC56_2237) | thiD | 2340388..2341218 (+) | 831 | WP_000594950.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| CSC56_RS12115 (CSC56_2238) | thiM | 2341202..2341993 (+) | 792 | WP_103151993.1 | hydroxyethylthiazole kinase | - |
| CSC56_RS12120 (CSC56_2239) | thiE | 2341995..2342636 (+) | 642 | WP_000483162.1 | thiamine phosphate synthase | - |
Sequence
Protein
Download Length: 131 a.a. Molecular weight: 15042.09 Da Isoelectric Point: 5.6824
>NTDB_id=294556 CSC56_RS12095 WP_000932694.1 2337839..2338234(+) (ssb) [Staphylococcus aureus strain AR_0471]
MLNKIVIVGRLTKDAQIFEKEDRKIATFCVATHRNYKDENGEIVCDYLFCKAFGKLASNIEKYTNQGTLVGITGQMRSRK
YDKDGQTHFVTELYVETIKFMSPKSQNNEILSDSILDIDSQNIDNHDLLEI
MLNKIVIVGRLTKDAQIFEKEDRKIATFCVATHRNYKDENGEIVCDYLFCKAFGKLASNIEKYTNQGTLVGITGQMRSRK
YDKDGQTHFVTELYVETIKFMSPKSQNNEILSDSILDIDSQNIDNHDLLEI
Nucleotide
Download Length: 396 bp
>NTDB_id=294556 CSC56_RS12095 WP_000932694.1 2337839..2338234(+) (ssb) [Staphylococcus aureus strain AR_0471]
ATGCTAAATAAAATCGTAATTGTCGGGAGACTGACGAAAGACGCACAAATATTTGAAAAGGAGGATAGAAAAATTGCAAC
GTTTTGTGTTGCAACGCACCGAAATTATAAAGATGAAAATGGAGAAATCGTCTGTGATTACTTATTCTGTAAAGCATTTG
GCAAGTTAGCTTCTAATATAGAAAAATATACTAATCAAGGTACATTGGTTGGTATAACTGGTCAAATGAGATCAAGAAAG
TATGATAAAGACGGACAAACACACTTTGTCACTGAATTATATGTTGAAACTATAAAATTTATGTCCCCTAAATCCCAAAA
TAATGAAATTCTCTCAGATAGTATTTTAGATATTGACTCTCAAAATATAGATAATCATGACTTATTAGAAATTTAA
ATGCTAAATAAAATCGTAATTGTCGGGAGACTGACGAAAGACGCACAAATATTTGAAAAGGAGGATAGAAAAATTGCAAC
GTTTTGTGTTGCAACGCACCGAAATTATAAAGATGAAAATGGAGAAATCGTCTGTGATTACTTATTCTGTAAAGCATTTG
GCAAGTTAGCTTCTAATATAGAAAAATATACTAATCAAGGTACATTGGTTGGTATAACTGGTCAAATGAGATCAAGAAAG
TATGATAAAGACGGACAAACACACTTTGTCACTGAATTATATGTTGAAACTATAAAATTTATGTCCCCTAAATCCCAAAA
TAATGAAATTCTCTCAGATAGTATTTTAGATATTGACTCTCAAAATATAGATAATCATGACTTATTAGAAATTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Staphylococcus aureus N315 |
100 |
100 |
1 |
| ssb | Staphylococcus aureus MW2 |
99.237 |
100 |
0.992 |