Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | CSC57_RS12440 | Genome accession | NZ_CP029649 |
| Coordinates | 2442435..2442830 (+) | Length | 131 a.a. |
| NCBI ID | WP_000932694.1 | Uniprot ID | - |
| Organism | Staphylococcus aureus strain AR_0472 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 2437435..2447830
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CSC57_RS12410 (CSC57_2289) | - | 2438696..2439100 (+) | 405 | WP_001094394.1 | F0F1 ATP synthase subunit epsilon | - |
| CSC57_RS12415 | - | 2439436..2439528 (+) | 93 | WP_031824610.1 | hypothetical protein | - |
| CSC57_RS12420 (CSC57_2290) | - | 2439660..2439893 (+) | 234 | WP_000384523.1 | DUF1146 family protein | - |
| CSC57_RS12425 (CSC57_2291) | murA | 2440004..2441269 (+) | 1266 | WP_000358006.1 | UDP-N-acetylglucosamine 1-carboxyvinyltransferase | - |
| CSC57_RS12430 (CSC57_2292) | fabZ | 2441303..2441743 (+) | 441 | WP_000447678.1 | 3-hydroxyacyl-ACP dehydratase FabZ | - |
| CSC57_RS12435 (CSC57_2293) | - | 2441801..2442241 (-) | 441 | WP_000846746.1 | YwpF-like family protein | - |
| CSC57_RS12440 (CSC57_2294) | ssb | 2442435..2442830 (+) | 396 | WP_000932694.1 | single-stranded DNA-binding protein | Machinery gene |
| CSC57_RS12445 (CSC57_2295) | sceD | 2443219..2443914 (+) | 696 | WP_000752001.1 | lytic transglycosylase SceD | - |
| CSC57_RS12450 (CSC57_2297) | tenA | 2444301..2444990 (+) | 690 | WP_000396064.1 | thiaminase II | - |
| CSC57_RS12455 (CSC57_2298) | thiD | 2444983..2445813 (+) | 831 | WP_000594951.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| CSC57_RS12460 (CSC57_2299) | thiM | 2445797..2446588 (+) | 792 | WP_110179779.1 | hydroxyethylthiazole kinase | - |
| CSC57_RS12465 (CSC57_2300) | thiE | 2446590..2447231 (+) | 642 | WP_000483153.1 | thiamine phosphate synthase | - |
Sequence
Protein
Download Length: 131 a.a. Molecular weight: 15042.09 Da Isoelectric Point: 5.6824
>NTDB_id=294517 CSC57_RS12440 WP_000932694.1 2442435..2442830(+) (ssb) [Staphylococcus aureus strain AR_0472]
MLNKIVIVGRLTKDAQIFEKEDRKIATFCVATHRNYKDENGEIVCDYLFCKAFGKLASNIEKYTNQGTLVGITGQMRSRK
YDKDGQTHFVTELYVETIKFMSPKSQNNEILSDSILDIDSQNIDNHDLLEI
MLNKIVIVGRLTKDAQIFEKEDRKIATFCVATHRNYKDENGEIVCDYLFCKAFGKLASNIEKYTNQGTLVGITGQMRSRK
YDKDGQTHFVTELYVETIKFMSPKSQNNEILSDSILDIDSQNIDNHDLLEI
Nucleotide
Download Length: 396 bp
>NTDB_id=294517 CSC57_RS12440 WP_000932694.1 2442435..2442830(+) (ssb) [Staphylococcus aureus strain AR_0472]
ATGCTAAATAAAATCGTAATTGTCGGGAGACTGACGAAAGACGCACAAATATTTGAAAAGGAGGATAGAAAAATTGCAAC
GTTTTGTGTTGCAACGCACCGAAATTATAAAGATGAAAATGGAGAAATCGTCTGTGATTACTTATTCTGTAAAGCATTTG
GCAAGTTAGCTTCTAATATAGAAAAATATACTAATCAAGGTACATTGGTTGGTATAACTGGTCAAATGAGATCAAGAAAG
TATGATAAAGACGGACAAACACACTTTGTCACTGAATTATATGTTGAAACAATAAAATTTATGTCCCCTAAATCCCAAAA
TAATGAAATTCTCTCAGATAGTATTTTAGATATTGACTCTCAAAATATAGATAATCATGACTTATTAGAAATTTAA
ATGCTAAATAAAATCGTAATTGTCGGGAGACTGACGAAAGACGCACAAATATTTGAAAAGGAGGATAGAAAAATTGCAAC
GTTTTGTGTTGCAACGCACCGAAATTATAAAGATGAAAATGGAGAAATCGTCTGTGATTACTTATTCTGTAAAGCATTTG
GCAAGTTAGCTTCTAATATAGAAAAATATACTAATCAAGGTACATTGGTTGGTATAACTGGTCAAATGAGATCAAGAAAG
TATGATAAAGACGGACAAACACACTTTGTCACTGAATTATATGTTGAAACAATAAAATTTATGTCCCCTAAATCCCAAAA
TAATGAAATTCTCTCAGATAGTATTTTAGATATTGACTCTCAAAATATAGATAATCATGACTTATTAGAAATTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Staphylococcus aureus N315 |
100 |
100 |
1 |
| ssb | Staphylococcus aureus MW2 |
99.237 |
100 |
0.992 |