Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   EQY76_RS04650 Genome accession   NZ_CP035230
Coordinates   899271..900065 (+) Length   264 a.a.
NCBI ID   WP_029726844.1    Uniprot ID   -
Organism   Bacillus subtilis strain SRCM103551     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 894271..905065
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EQY76_RS04620 (EQY76_04620) sxzA 895110..896141 (+) 1032 WP_003243057.1 iron ABC transporter permease -
  EQY76_RS04625 (EQY76_04625) yfhB 896256..897137 (+) 882 WP_046380867.1 PhzF family phenazine biosynthesis isomerase -
  EQY76_RS04630 (EQY76_04630) yfhC 897225..897809 (+) 585 WP_032723010.1 nitroreductase -
  EQY76_RS04635 (EQY76_04635) yfhD 897848..898039 (-) 192 WP_003233561.1 YfhD family protein -
  EQY76_RS04640 (EQY76_04640) yfhE 898106..898216 (-) 111 WP_003223230.1 YfhE family protein -
  EQY76_RS04645 (EQY76_04645) yfhF 898271..899182 (-) 912 WP_033883295.1 TIGR01777 family oxidoreductase -
  EQY76_RS04650 (EQY76_04650) recX 899271..900065 (+) 795 WP_029726844.1 recombination regulator RecX Regulator
  EQY76_RS04655 (EQY76_04655) yfhH 900067..900381 (+) 315 WP_003244592.1 YfhH family protein -
  EQY76_RS04660 (EQY76_04660) yfhI 900524..901717 (+) 1194 WP_003243500.1 MFS transporter -
  EQY76_RS04665 (EQY76_04665) sspK 901749..901901 (-) 153 WP_003223241.1 small, acid-soluble spore protein K -
  EQY76_RS04670 (EQY76_04670) yfhJ 902026..902295 (+) 270 WP_015252516.1 YfhJ family protein -
  EQY76_RS04675 (EQY76_04675) yfhK 902440..902958 (+) 519 WP_015252515.1 SH3 domain-containing protein -
  EQY76_RS04680 (EQY76_04680) spdL 903043..903375 (+) 333 WP_003242803.1 SdpC immunity protein SpdL -
  EQY76_RS04685 (EQY76_04685) ephM 903362..904222 (+) 861 WP_003243419.1 epoxide hydrolase EphM -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 31047.25 Da        Isoelectric Point: 6.6686

>NTDB_id=294489 EQY76_RS04650 WP_029726844.1 899271..900065(+) (recX) [Bacillus subtilis strain SRCM103551]
MPFITKISTQKKNTERFNIFLDDKYAFSVDADVLVKFELKKGKELDDLDIIEIQYGDEVKKGFNRALDFLSYRMRSTKEV
EDHLKKKETSPPVIAEVIHRLNDYKYLNDQEFAAAYVSTHKKTNGKGPDVLFRELRAKGIDDDTIKEALSSFSFEDQTRE
AVKHVEKLLKKDKKLSTKEFKQRAQLQLQRKGFSFDVISAAMDQIEYENDEDTEKEALRLHAEKAFRKYRYDGSYESAMK
VKQFLFRKGFSLDLIEQLLQEEEY

Nucleotide


Download         Length: 795 bp        

>NTDB_id=294489 EQY76_RS04650 WP_029726844.1 899271..900065(+) (recX) [Bacillus subtilis strain SRCM103551]
ATGCCGTTTATTACAAAAATATCAACGCAAAAAAAGAATACGGAACGCTTCAATATTTTTTTGGATGATAAATACGCCTT
CAGTGTGGACGCGGATGTGCTCGTGAAATTTGAGCTCAAGAAGGGAAAAGAACTCGATGATCTTGACATCATTGAGATTC
AATACGGCGATGAAGTGAAGAAAGGCTTCAACCGTGCGCTTGACTTTTTATCCTATCGAATGCGGTCGACGAAAGAGGTC
GAGGACCACTTAAAGAAAAAAGAAACCTCGCCCCCCGTCATTGCGGAAGTCATCCATAGGCTTAACGATTACAAGTACTT
AAACGACCAGGAATTTGCCGCAGCCTATGTCAGCACTCACAAAAAAACAAACGGAAAAGGCCCTGATGTTTTGTTCAGAG
AGCTAAGAGCGAAGGGAATTGATGACGATACAATTAAGGAGGCGCTAAGTTCCTTTTCCTTTGAAGATCAGACAAGAGAA
GCGGTCAAGCATGTTGAAAAGCTTCTCAAAAAAGATAAAAAGCTTTCGACGAAAGAATTCAAACAGCGCGCCCAGCTGCA
GCTTCAGCGCAAGGGCTTCTCATTTGATGTTATCAGCGCGGCGATGGATCAGATTGAATATGAAAATGATGAAGACACGG
AGAAAGAAGCGCTGCGCCTTCACGCGGAAAAAGCGTTTAGAAAATACCGCTATGACGGCTCATATGAAAGCGCCATGAAG
GTCAAACAATTTTTATTCCGCAAAGGATTCTCACTCGATTTAATCGAGCAATTACTGCAGGAAGAGGAGTACTGA

Domains

Predicted by InterProScan.

RecX family (RecX_HTH2)

(84-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

99.621

100

0.996

Multiple sequence alignment