Detailed information NTG0294401

Bioinformatically predicted

Overview

• Name: comGD
• Type: Machinery gene
• Locus tag: EQY74_RS14750
• Genome accession: NZ_CP035228
• Coordinates: 2770850..2771287 (-)
• Length: 145 a.a.
• NCBI ID: WP_071583679.1
• Uniprot ID: -
• Organism: Bacillus licheniformis strain SRCM103529
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2765850..2776287

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EQY74_RS14700 (EQY74_14700)	sinI	2766019..2766195 (+)	177	WP_003183444.1	anti-repressor SinI family protein	Regulator
EQY74_RS14705 (EQY74_14705)	sinR	2766229..2766564 (+)	336	WP_006637528.1	helix-turn-helix domain-containing protein	Regulator
EQY74_RS14710 (EQY74_14710)	-	2766669..2767463 (-)	795	WP_003183447.1	TasA family protein	-
EQY74_RS14715 (EQY74_14715)	-	2767537..2768121 (-)	585	WP_003183449.1	signal peptidase I	-
EQY74_RS14720 (EQY74_14720)	tapA	2768118..2768846 (-)	729	WP_011198112.1	amyloid fiber anchoring/assembly protein TapA	-
EQY74_RS14725 (EQY74_14725)	-	2769156..2769443 (+)	288	WP_223307118.1	YqzG/YhdC family protein	-
EQY74_RS14730 (EQY74_14730)	-	2769473..2769655 (-)	183	WP_003183456.1	YqzE family protein	-
EQY74_RS14735 (EQY74_14735)	comGG	2769744..2770109 (-)	366	WP_003183459.1	competence type IV pilus minor pilin ComGG	-
EQY74_RS14740 (EQY74_14740)	comGF	2770122..2770610 (-)	489	WP_011201694.1	competence type IV pilus minor pilin ComGF	-
EQY74_RS14745 (EQY74_14745)	comGE	2770519..2770866 (-)	348	WP_026699160.1	competence type IV pilus minor pilin ComGE	-
EQY74_RS14750 (EQY74_14750)	comGD	2770850..2771287 (-)	438	WP_071583679.1	competence type IV pilus minor pilin ComGD	Machinery gene
EQY74_RS14755 (EQY74_14755)	comGC	2771293..2771586 (-)	294	WP_003183466.1	competence type IV pilus major pilin ComGC	Machinery gene
EQY74_RS14760 (EQY74_14760)	comGB	2771600..2772634 (-)	1035	WP_011198115.1	competence type IV pilus assembly protein ComGB	Machinery gene
EQY74_RS14765 (EQY74_14765)	comGA	2772624..2773688 (-)	1065	WP_003183477.1	competence type IV pilus ATPase ComGA	Machinery gene
EQY74_RS14770 (EQY74_14770)	-	2773845..2774684 (-)	840	WP_071583678.1	STAS domain-containing protein	-
EQY74_RS14780 (EQY74_14780)	-	2774926..2775303 (-)	378	WP_003183482.1	Spx/MgsR family RNA polymerase-binding regulatory protein	-
EQY74_RS14785 (EQY74_14785)	-	2775512..2775757 (+)	246	WP_003183483.1	DUF2626 domain-containing protein	-

Sequence

Protein

• Length: 145 a.a.
• Molecular weight: 16291.15 Da
• Isoelectric Point: 9.6739

>NTDB_id=294401 EQY74_RS14750 WP_071583679.1 2770850..2771287(-) (comGD) [Bacillus licheniformis strain SRCM103529]
MNQKGFTLLESLTVLMIGSIMFSLLFALLPPIYEKRIVQHFVSQLEEDLLYAQQTALVRHTTVKVQFDFAGCRYIMKHSD
EGSSPELVRTYSCNIAIKKSTLKPILTFNPSGVPNQVGKIVIDTQHASFILTIYLGSGKINVQKK

Nucleotide

• Length: 438 bp

>NTDB_id=294401 EQY74_RS14750 WP_071583679.1 2770850..2771287(-) (comGD) [Bacillus licheniformis strain SRCM103529]
ATGAATCAAAAAGGATTTACGCTTTTGGAAAGTTTAACTGTATTGATGATCGGTTCTATTATGTTCTCTCTTCTCTTTGC
TCTACTGCCTCCCATTTATGAAAAAAGAATCGTTCAGCACTTTGTCTCACAGCTTGAAGAGGATTTGCTTTACGCTCAGC
AGACGGCTCTCGTCCGCCATACGACGGTTAAGGTGCAGTTTGACTTTGCCGGCTGCCGCTATATCATGAAGCATTCGGAC
GAAGGCTCATCGCCTGAACTGGTCAGGACATACAGCTGCAATATCGCAATCAAAAAGTCGACGCTCAAACCAATTCTTAC
TTTTAATCCAAGCGGTGTTCCGAATCAAGTGGGAAAGATCGTGATCGATACACAGCATGCCTCTTTTATACTGACGATCT
ATTTAGGAAGCGGAAAGATTAATGTTCAAAAAAAATAA

Domains

Predicted by InterProScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (2-25)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGD	Bacillus subtilis subsp. subtilis str. 168	39.161	98.621	0.386