Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   EQW70_RS21645 Genome accession   NZ_CP035226
Coordinates   4136263..4137057 (-) Length   264 a.a.
NCBI ID   WP_021481078.1    Uniprot ID   -
Organism   Bacillus subtilis strain SRCM103517     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 4131263..4142057
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EQW70_RS21625 (EQW70_21625) rocD 4131842..4133047 (-) 1206 WP_024571526.1 ornithine aminotransferase -
  EQW70_RS21630 (EQW70_21630) rocR 4133288..4134673 (+) 1386 WP_128740891.1 arginine utilization regulatory protein RocR -
  EQW70_RS21635 (EQW70_21635) - 4134663..4134806 (-) 144 Protein_4201 ATP-binding protein -
  EQW70_RS21640 (EQW70_21640) htrA 4134979..4136181 (-) 1203 WP_106610979.1 serine protease HtrC Regulator
  EQW70_RS21645 (EQW70_21645) vicX 4136263..4137057 (-) 795 WP_021481078.1 MBL fold metallo-hydrolase Regulator
  EQW70_RS21650 (EQW70_21650) walI 4137079..4137921 (-) 843 WP_003244037.1 WalRK two-component regulatory system regulator WalI -
  EQW70_RS21655 (EQW70_21655) walH 4137908..4139275 (-) 1368 WP_032722849.1 WalRK two-component regulatory system regulator WalH -
  EQW70_RS21660 (EQW70_21660) walK 4139265..4141100 (-) 1836 WP_009968432.1 cell wall metabolism sensor histidine kinase WalK -
  EQW70_RS21665 (EQW70_21665) walR 4141108..4141815 (-) 708 WP_003244363.1 cell wall metabolism DNA-binding response regulator WalR -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 29282.34 Da        Isoelectric Point: 6.2282

>NTDB_id=294306 EQW70_RS21645 WP_021481078.1 4136263..4137057(-) (vicX) [Bacillus subtilis strain SRCM103517]
MSLQFSVLASGSTGNAFYLETEDHAFLVDAGLSGKAMDGLMAQIGRKLDDVDGIFVTHEHSDHIKGLGVVARKYKLPIYA
NEKTWKAMENQIGKIDTDQKFVFPMETVKSFGGLDVESFGVSHDAAEPMFYVFHYNGRKLALMTDTGYVSDRMKGIIRSA
NVFVFESNHDVGMLQMGRYPWSIKRRILSDVGHVSNEDAALAMTDVIGDETSRIYLAHLSQDNNMKELARMSVQQTLASK
GFVTGKTFDLYDTDPKKATPLCAV

Nucleotide


Download         Length: 795 bp        

>NTDB_id=294306 EQW70_RS21645 WP_021481078.1 4136263..4137057(-) (vicX) [Bacillus subtilis strain SRCM103517]
ATGAGCTTGCAATTTAGCGTACTTGCGAGCGGGAGTACGGGAAATGCGTTTTACCTCGAAACAGAGGATCACGCATTTTT
AGTGGACGCCGGTTTGAGCGGAAAAGCCATGGATGGGCTGATGGCGCAGATCGGGCGTAAGCTGGATGATGTAGACGGCA
TTTTTGTGACGCATGAGCATAGTGACCATATTAAGGGCCTTGGTGTCGTCGCCAGAAAGTACAAGCTTCCGATCTATGCG
AATGAGAAGACTTGGAAAGCGATGGAGAATCAAATCGGCAAAATTGACACCGATCAAAAGTTTGTATTTCCAATGGAGAC
GGTGAAGTCGTTTGGCGGACTTGATGTTGAATCGTTTGGCGTCTCCCACGATGCGGCGGAACCGATGTTTTATGTGTTCC
ATTATAACGGCCGAAAGCTCGCATTAATGACAGATACGGGATATGTCAGCGACCGAATGAAAGGCATTATCCGTTCAGCG
AATGTGTTTGTGTTTGAAAGCAATCACGATGTCGGTATGCTGCAAATGGGGAGATACCCATGGAGCATTAAGCGGCGGAT
TTTAAGTGACGTCGGGCACGTGTCAAATGAAGATGCTGCCTTGGCGATGACGGATGTCATTGGCGATGAGACGTCTCGTA
TTTACCTGGCGCATTTGAGCCAGGACAACAACATGAAGGAGCTGGCAAGAATGTCTGTGCAGCAGACATTGGCTTCTAAA
GGATTTGTGACGGGTAAGACATTTGACTTATACGACACCGATCCGAAGAAGGCCACTCCGCTTTGCGCTGTATAA

Domains

Predicted by InterProScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(12-218)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

53.435

99.242

0.53