Detailed information
Bioinformatically predicted
Overview
| Name | xcpV | Type | Machinery gene |
| Locus tag | DLK06_RS11020 | Genome accession | NZ_CP029610 |
| Coordinates | 2253765..2254145 (-) | Length | 126 a.a. |
| NCBI ID | WP_032057019.1 | Uniprot ID | A0A009RST6 |
| Organism | Acinetobacter pittii strain ST220 | ||
| Function | pseudopilus assembly (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 2248765..2259145
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DLK06_RS10990 (DLK06_11005) | tadA | 2248829..2249332 (-) | 504 | WP_002121378.1 | tRNA adenosine(34) deaminase TadA | - |
| DLK06_RS10995 (DLK06_11010) | hibch | 2249338..2250462 (-) | 1125 | WP_016803061.1 | enoyl-CoA hydratase/isomerase family protein | - |
| DLK06_RS11000 (DLK06_11015) | ung | 2250459..2251172 (-) | 714 | WP_002121342.1 | uracil-DNA glycosylase | - |
| DLK06_RS11005 (DLK06_11020) | - | 2251226..2251822 (-) | 597 | WP_002121363.1 | 6-pyruvoyl trahydropterin synthase family protein | - |
| DLK06_RS11010 (DLK06_11025) | gspK | 2252050..2253009 (-) | 960 | WP_005076277.1 | type II secretion system minor pseudopilin GspK | - |
| DLK06_RS11015 (DLK06_11030) | xcpW | 2253010..2253765 (-) | 756 | WP_032057017.1 | type II secretion system minor pseudopilin GspJ | Machinery gene |
| DLK06_RS11020 (DLK06_11035) | xcpV | 2253765..2254145 (-) | 381 | WP_032057019.1 | type II secretion system minor pseudopilin GspI | Machinery gene |
| DLK06_RS11025 (DLK06_11040) | - | 2254135..2254689 (-) | 555 | WP_005069534.1 | type II secretion system protein | - |
| DLK06_RS11030 (DLK06_11045) | - | 2254696..2255304 (-) | 609 | WP_005069536.1 | TetR/AcrR family transcriptional regulator | - |
| DLK06_RS11035 (DLK06_11050) | ycfH | 2255341..2256114 (-) | 774 | WP_017399499.1 | TatD family hydrolase | - |
| DLK06_RS11040 (DLK06_11055) | pilZ | 2256132..2256473 (-) | 342 | WP_002121335.1 | PilZ domain-containing protein | - |
| DLK06_RS11045 (DLK06_11060) | holB | 2256484..2257464 (-) | 981 | WP_032057020.1 | DNA polymerase III subunit delta' | - |
| DLK06_RS11050 (DLK06_11065) | kdsB | 2257478..2258239 (-) | 762 | WP_002121419.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | - |
Sequence
Protein
Download Length: 126 a.a. Molecular weight: 13902.03 Da Isoelectric Point: 9.4463
>NTDB_id=294191 DLK06_RS11020 WP_032057019.1 2253765..2254145(-) (xcpV) [Acinetobacter pittii strain ST220]
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVALMEINQEWLEGTQSKQVTSQGETWQI
DKSAQSTISPNVQKVDVQVSLYDSDKGKVQNGITHLVFFNYPVKAK
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVALMEINQEWLEGTQSKQVTSQGETWQI
DKSAQSTISPNVQKVDVQVSLYDSDKGKVQNGITHLVFFNYPVKAK
Nucleotide
Download Length: 381 bp
>NTDB_id=294191 DLK06_RS11020 WP_032057019.1 2253765..2254145(-) (xcpV) [Acinetobacter pittii strain ST220]
ATGAAATCTAAAGGCTTTACTCTATTAGAAGTAATGGTTGCTTTAGCAATTTTTGCAGTGGCGGCTGTCGCGTTAACTAA
AGTAGCCATGCAATATACTCAATCTACCTCAAATGCAATTCTTAGAACAAAAGCACAGTTTGTCGCAATGAATGAAGTTG
CTTTAATGGAAATAAATCAGGAATGGCTCGAAGGTACACAAAGCAAGCAAGTGACTTCTCAAGGTGAGACTTGGCAGATT
GATAAATCTGCGCAATCTACAATTAGTCCAAATGTTCAAAAAGTAGATGTACAAGTTAGTTTATATGATTCTGATAAGGG
GAAAGTTCAAAATGGTATTACTCACTTGGTATTTTTTAATTACCCCGTGAAAGCAAAATAA
ATGAAATCTAAAGGCTTTACTCTATTAGAAGTAATGGTTGCTTTAGCAATTTTTGCAGTGGCGGCTGTCGCGTTAACTAA
AGTAGCCATGCAATATACTCAATCTACCTCAAATGCAATTCTTAGAACAAAAGCACAGTTTGTCGCAATGAATGAAGTTG
CTTTAATGGAAATAAATCAGGAATGGCTCGAAGGTACACAAAGCAAGCAAGTGACTTCTCAAGGTGAGACTTGGCAGATT
GATAAATCTGCGCAATCTACAATTAGTCCAAATGTTCAAAAAGTAGATGTACAAGTTAGTTTATATGATTCTGATAAGGG
GAAAGTTCAAAATGGTATTACTCACTTGGTATTTTTTAATTACCCCGTGAAAGCAAAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| xcpV | Acinetobacter baumannii D1279779 |
95.238 |
100 |
0.952 |